RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SPIN2BQ9BPZ2 258 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 MAGEH1Q9H213 219 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 WDR6Q9NNW5 1121 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 LSM5Q9Y4Y9 91 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 PCDHGC4Q9Y5F7 938 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 MYH2Q9UKX2 1941 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 INPPL1O15357 1258 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 LCMT2O60294 686 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 SPDEFO95238 335 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SNAPINO95295 136 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 TLE1Q04724 770 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 ZNF514Q96K75 400 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 SYT17Q9BSW7 474 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 PAPOLGQ9BWT3 736 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 TSPAN10Q9H1Z9 355 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 ACTR3BQ9P1U1 418 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 TTLL8A6PVC2 850 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 GRXCR1A8MXD5 290 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 RETP07949 1114 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 OR1D2P34982 312 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 NRLP54845 237 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 SNRPD2P62316 118 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 HABP2Q14520 560 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 PEA15Q15121 130 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 ERN2Q76MJ5 926 aaKnown RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 OR5H2Q8NGV7 314 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 OR10T2Q8NGX3 314 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 GCDHQ92947 438 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 NKD2Q969F2 451 aaPredicted RBP13.33□□□□□ -0.28
RERE-204ENST00000400908 MAF1Q9H063 256 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
RERE-204ENST00000400908 GABRDO14764 452 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 B4GALT4O60513 344 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 RFPL2O75678 378 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 AMZ1Q400G9 498 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ZNF705AQ6ZN79 300 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 LRRC46Q96FV0 321 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ZNF75AQ96N20 296 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 QPCTLQ9NXS2 382 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 A0A0G2JLL6 359 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 NDUFS4O43181 175 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 CREG1O75629 220 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 KLK1P06870 262 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 MC2RQ01718 297 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 VITQ6UXI7 678 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PRRT2Q7Z6L0 340 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 DRAXINQ8NBI3 349 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 OR2AP1Q8NGE2 309 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PGAM5Q96HS1 289 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 EBF4Q9BQW3 602 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PAK1IP1Q9NWT1 392 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 B3GALT1Q9Y5Z6 326 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 GSK3BP49841 420 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ACTBP60709 375 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ERVK-16P61578 105 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ACTG1P63261 375 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PRAMEF14Q5SWL7 426 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ARHGAP11AQ6P4F7 1023 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PDSS2Q86YH6 399 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 OR13C3Q8NGS6 347 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 C10orf82Q8WW14 230 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 SLC6A16Q9GZN6 736 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 OR2AG1Q9H205 316 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 MRM3Q9HC36 420 aaKnown RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 PEX12O00623 359 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 ITM2AO43736 263 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 DNAJB5O75953 348 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 TFPTP0C1Z6 253 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 RAB6AP20340 208 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 RABL3Q5HYI8 236 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 SLC22A25Q6T423 547 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 TMEM185AQ8NFB2 350 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 CACNG6Q9BXT2 260 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 RNF208Q9H0X6 261 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 APMAPQ9HDC9 416 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 SALL4Q9UJQ4 1053 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PPM1HQ9ULR3 514 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 DERAQ9Y315 318 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 ZFP37Q9Y6Q3 630 aaPredicted RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 BHLHE40O14503 412 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 AMY2AP04746 511 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 CD52P31358 61 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 NDST2P52849 883 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
RERE-204ENST00000400908 HMGCS1Q01581 520 aa13.32□□□□□ -0.28
RERE-204ENST00000400908 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms