RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 APOBEC4Q8WW27 367 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 NR4A3Q92570 626 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KLK6Q92876 244 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EXOSC8Q96B26 276 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 AMDHD1Q96NU7 426 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RPP25Q9BUL9 199 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FUNDC2Q9BWH2 189 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRDM7Q9NQW5 492 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MOSPD1Q9UJG1 213 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SH3GLB1Q9Y371 365 aa16.8■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRAMEF33A0A0G2JMD5 474 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SH3D21A4FU49 640 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 XPNPEP2O43895 674 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRAMEF10O60809 474 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CYP4B1P13584 511 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BCL6P41182 706 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SOX9P48436 509 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KCNJ5P48544 419 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RPS15AP62244 130 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 RELAQ04206 551 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HTR4Q13639 388 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LRRC32Q14392 662 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EXOC3L2Q2M3D2 409 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FGD3Q5JSP0 725 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 AMIGO1Q86WK6 493 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ENTHD1Q8IYW4 607 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TMEM19Q96HH6 336 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DHRS1Q96LJ7 313 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ZNF354BQ96LW1 612 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 WDR92Q96MX6 357 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BBS4Q96RK4 519 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SIGLEC11Q96RL6 698 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MYOCQ99972 504 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TWSG1Q9GZX9 223 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GIMAP4Q9NUV9 329 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TMCC3Q9ULS5 477 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ASB4Q9Y574 426 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 A0A1W2PPW3 197 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HMGN4O00479 90 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PCDHGA12O60330 932 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ADAM23O75077 832 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 WBP4O75554 376 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ADAP00813 363 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACADMP11310 421 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CD247P20963 164 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CBLP22681 906 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ATP5A1P25705 553 aaKnown RBP16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FMO3P31513 532 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR1E2P47887 323 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KHKP50053 298 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HSPB3Q12988 150 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KIR2DS3Q14952 304 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MMP21Q8N119 569 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACOT4Q8N9L9 421 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 OR56A1Q8NGH5 318 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BBS10Q8TAM1 723 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 LCN9Q8WX39 176 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC35G5Q96KT7 338 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ALPK1Q96QP1 1244 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 C17orf62Q9BQA9 187 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DCUN1D5Q9BTE7 237 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BTBD2Q9BX70 525 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 XKR8Q9H6D3 395 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC6A20Q9NP91 592 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRDM8Q9NQV8 689 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TEX10Q9NXF1 929 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ANKMY1Q9P2S6 941 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ERVK-18Q9QC07 812 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MGAT4BQ9UQ53 548 aa16.79■□□□□ 0.28
HLA-DQB1-204ENST00000399084 PRAMEF25A6NGN4 478 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLC31A1O15431 190 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ERI3O43414 337 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GABARAPO95166 117 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SERPIND1P05546 499 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BCHEP06276 602 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MPIP34949 423 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GPC1P35052 558 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CRISP3P54108 245 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GP2P55259 537 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CDC42P60953 191 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 HYAL2Q12891 473 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 SLAMF1Q13291 335 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CEBPEQ15744 281 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 DUSP7Q16829 419 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FBXO43Q4G163 708 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 UBE2UQ5VVX9 321 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 TAGAPQ8N103 731 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 BORCS5Q969J3 196 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ERLEC1Q96DZ1 483 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GLIPR2Q9H4G4 154 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 FGF22Q9HCT0 170 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 KLF15Q9UIH9 416 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 ACAD8Q9UKU7 415 aa16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 GPC6Q9Y625 555 aaPredicted RBP16.78■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MKI67P46013 3256 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.28
HLA-DQB1-204ENST00000399084 MYO10Q9HD67 2058 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms