RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CLHC1Q8NHS4 586 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 RFWD2Q8NHY2 731 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NUDT8Q8WV74 236 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 THOC1Q96FV9 657 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TSSK3Q96PN8 268 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 RPF2Q9H7B2 306 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KCNK13Q9HB14 408 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TMED5Q9Y3A6 229 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MED13Q9UHV7 2174 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IGHV1-45A0A0A0MS14 117 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 G6PDP11413 515 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LBPP18428 481 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SOX18P35713 384 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 BUD31P41223 144 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IDH3AP50213 366 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 UCNP55089 124 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ERVK-8P63133 956 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EEF1A2Q05639 463 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PTGR1Q14914 329 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NSDHLQ15738 373 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ST3GAL2Q16842 350 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SMU1Q2TAY7 513 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TMEM198Q66K66 360 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CPZQ66K79 652 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FAM180BQ6P0A1 224 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DGAT2L6Q6ZPD8 337 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 RAB43Q86YS6 212 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LIX1Q8N485 282 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ACTRT2Q8TDY3 377 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TANKQ92844 425 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NACC2Q96BF6 587 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 P4HTMQ9NXG6 502 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FBXL4Q9UKA2 621 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MRPS33Q9Y291 106 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SPACA6W5XKT8 324 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ITPR1Q14643 2758 aa11.63□□□□□ -0.55
HLA-DQB1-203ENST00000399082 C1orf226A1L170 272 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 BLACEA4D250 179 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CLDN4O14493 209 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ANKRD28O15084 1053 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DIAPH2O60879 1101 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 VPS4BO75351 444 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MYO1DO94832 1006 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TGDSO95455 350 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GPR75O95800 540 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IGHEP01854 428 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DDCP20711 480 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GSTM5P46439 218 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 AQP5P55064 265 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CXADRP78310 365 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 C2orf80Q0P641 193 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 Q0VFX4 171 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CHAF1BQ13112 559 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLC13A2Q13183 592 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PDE7AQ13946 482 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MPEG1Q2M385 716 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LSM12Q3MHD2 195 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF385BQ569K4 471 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SFT2D3Q587I9 215 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IKBIPQ70UQ0 350 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CPEB2Q7Z5Q1 589 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CDC26Q8NHZ8 85 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CNRIP1Q96F85 164 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IMMP1LQ96LU5 166 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF681Q96N22 645 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF700Q9H0M5 742 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PRORYQ9H606 182 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NPHS2Q9NP85 383 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PFDN4Q9NQP4 134 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 AIG1Q9NVV5 245 aa11.62□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CACNA1GO43497 2377 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 POLR3GO15318 223 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 AKAP10O43572 662 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GUCY1B2O75343 617 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LRATO95237 230 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CELA2AP08217 269 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 VIMP08670 466 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PRPS2P11908 318 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DRD2P14416 443 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TLX1P31314 330 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LSP1P33241 339 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PTGER1P34995 402 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ALDH9A1P49189 494 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OR4D2P58180 307 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 HEPACAMQ14CZ8 416 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DEFB109BQ30KR1 87 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ANKRD26P1Q6NSI1 321 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 C19orf48Q6RUI8 117 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TICAM1Q8IUC6 712 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 RIMKLAQ8IXN7 391 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TMEM132CQ8N3T6 1108 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KRTCAP2Q8N6L1 136 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NFAM1Q8NET5 270 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DOK4Q8TEW6 326 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 STON2Q8WXE9 905 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 THAP4Q8WY91 577 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms