RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ALG10Q5BKT4 473 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 C15orf39Q6ZRI6 1047 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ANKRD13BQ86YJ7 626 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TCEANCQ8N8B7 351 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 OR52N2Q8NGI0 321 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SCGB1C1Q8TD33 95 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM125Q96AQ2 219 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 DDIT4LQ96D03 193 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SGTBQ96EQ0 304 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM74Q96NL1 305 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 PHOX2BQ99453 314 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 C7orf50Q9BRJ6 194 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 KLHL42Q9P2K6 505 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 B4GALT7Q9UBV7 327 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 B4GALT6Q9UBX8 382 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TBX18O95935 607 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 GALTP07902 379 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 RETP07949 1114 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 H2BFMP0C1H6 154 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 RABGGTBP53611 331 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ST3GAL4Q11206 333 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 GTF2IRD2BQ6EKJ0 949 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 C3orf33Q6P1S2 294 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 GTF2IRD2Q86UP8 949 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 CCDC28AQ8IWP9 274 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 GDPD1Q8N9F7 314 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TOR1AIP2Q8NFQ8 470 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 NEIL3Q8TAT5 605 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 WDR92Q96MX6 357 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 NSUN3Q9H649 340 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 UNKLQ9H9P5 680 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 DNAJC27Q9NZQ0 273 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 NOTOA8MTQ0 251 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 FTCDNL1E5RQL4 147 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 HOXB2P14652 356 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ARRB1P49407 418 aaPredicted RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TUBB3Q13509 450 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TSPYL5Q86VY4 417 aaPredicted RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 RPLP0P6Q8NHW5 317 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 COQ8AQ8NI60 647 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC22A8Q8TCC7 542 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 FBXL8Q96CD0 374 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SPHK2Q9NRA0 654 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 UCKL1Q9NWZ5 548 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ZFR2Q9UPR6 939 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 A0A1W2PPL8 197 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 CLCA1A8K7I4 914 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 COCHO43405 550 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 PEX10O60683 326 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 CLEC3AO75596 197 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 EDNRBP24530 442 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 NUDT1P36639 197 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 MRPS10P82664 201 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM69Q5SWH9 247 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ZER1Q7Z7L7 766 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 IGDCC3Q8IVU1 814 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 RBM12BQ8IXT5 1001 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 OR5L2Q8NGL0 311 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SFXN5Q8TD22 340 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 CHPT1Q8WUD6 406 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 BRI3BPQ8WY22 251 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 BARD1Q99728 777 aaKnown RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 ADAM7Q9H2U9 754 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 C8orf33Q9H7E9 229 aaPredicted RBP8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 RDH14Q9HBH5 336 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 KCNN3Q9UGI6 736 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 SPO11Q9Y5K1 396 aa8.02□□□□□ -1.13
SPTLC3-201ENST00000399002 AGAP5A6NIR3 686 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 XPNPEP2O43895 674 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GPR32O75388 356 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OAZ2O95190 189 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 IFNA5P01569 189 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ITGAMP11215 1152 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 NDUFV2P19404 249 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ELK4P28324 431 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CD40LGP29965 261 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ETV6P41212 452 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CDH15P55291 814 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TAS2R31P59538 309 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ACTBP60709 375 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ACTG1P63261 375 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PLP2Q04941 152 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CHAF1BQ13112 559 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CDK10Q15131 360 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CARTPTQ16568 116 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 RTL6Q6ICC9 239 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MAMDC4Q6UXC1 1216 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SNX29P2Q8IUI4 249 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ASCC1Q8N9N2 400 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 DENND6BQ8NEG7 585 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR4E2Q8NGC2 313 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR13C3Q8NGS6 347 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR6N1Q8NGY5 312 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 LMX1AQ8TE12 382 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 DAZLQ92904 295 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 KCNA7Q96RP8 456 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 C17orf62Q9BQA9 187 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PBDC1Q9BVG4 233 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms