RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 LRFN4Q6PJG9 635 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 WDR20Q8TBZ3 569 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CA5BQ9Y2D0 317 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 PROM1O43490 865 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 DIO3P55073 304 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 EMX2Q04743 252 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 TNFAIP8L3Q5GJ75 292 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 KCTD9Q7L273 389 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CARM1Q86X55 608 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 OR5L2Q8NGL0 311 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ANKRA2Q9H9E1 313 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZNF224Q9NZL3 707 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 GGT2P36268 569 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SLC15A1P46059 708 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ASTE1Q2TB18 679 aaPredicted RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 DPH2Q9BQC3 489 aaPredicted RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 UCKL1Q9NWZ5 548 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SIT1Q9Y3P8 196 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 TEX13DA0A0J9YY54 714 aaPredicted RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 SRCP12931 536 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CERS1P27544 350 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 DCDC1P59894 354 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 KIAA0895LQ68EN5 471 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CRB3Q9BUF7 120 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CXorf21Q9HAI6 301 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZXDBP98169 803 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZNF33AQ06730 810 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 C7orf43Q8WVR3 580 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 DGCR14Q96DF8 476 aaKnown RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 GSKIPQ9P0R6 139 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CD1DP15813 335 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 GPR4P46093 362 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 FASLGP48023 281 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SLC6A11P48066 632 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 HERV-K104P61576 105 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 TRAM2Q15035 370 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 POLR1CO15160 346 aaPredicted RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 BNIP3Q12983 259 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 RBM39Q14498 530 aaKnown RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZNF630Q2M218 657 aaPredicted RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 DUS1LQ6P1R4 473 aaKnown RBP10.87□□□□□ -0.67
TTC28-201ENST00000397906 PLCZ1Q86YW0 608 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 FBXL3Q9UKT7 428 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 MYH10P35580 1976 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 KCNJ13O60928 360 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SLC15A3Q8IY34 581 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZDHHC7Q9NXF8 308 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 PISDQ9UG56 409 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CRYBG1Q9Y4K1 1723 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 TEX13CA0A0J9YWL9 993 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 MATN2O00339 956 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 VNN2O95498 520 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 GRM7Q14831 915 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 OR52P1PQ8NH57 321 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 CREB3L4Q8TEY5 395 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 MACROD1Q9BQ69 325 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 ZNF226Q9NYT6 803 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SLC7A11Q9UPY5 501 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 VDAC3Q9Y277 283 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 SGK494L7N484 410 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PLOD2O00469 737 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ZNF888P0CJ79 500 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 BMP1P13497 986 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PGCP20142 388 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EPGNQ6UW88 154 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 MKLN1Q9UL63 735 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 HIDE1A8MVS5 230 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 NPC1O15118 1278 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EMC8O43402 210 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 AK4P27144 223 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 CRYZQ08257 329 aaKnown RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 UMODL1-AS1Q8N2C9 162 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 GNPDA2Q8TDQ7 276 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 STON2Q8WXE9 905 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 OR2AT4A6NND4 320 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 CER1O95813 267 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 EEF1A1P5Q5VTE0 462 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 TP53INP2Q8IXH6 220 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 KLHDC8AQ8IYD2 350 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 TCEANCQ8N8B7 351 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 BORCS5Q969J3 196 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ACSL6Q9UKU0 697 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PEX16Q9Y5Y5 336 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 OR14I1A6ND48 311 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 PRAMEF26H0Y7S4 382 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 LAS2Q8IYD9 372 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 CEP76Q8TAP6 659 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 MYLIPQ8WY64 445 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 RMI1Q9H9A7 625 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 LIN52Q52LA3 116 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 OR5B2Q96R09 309 aa10.86□□□□□ -0.67
TTC28-201ENST00000397906 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
TTC28-201ENST00000397906 MYH11P35749 1972 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms