RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ASGR1P07306 291 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PEPDP12955 493 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 SSTR2P30874 369 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 CREMQ03060 361 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 GALEQ14376 348 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TBPL2Q6SJ96 375 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RFPL4BQ6ZWI9 263 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TRMT11Q7Z4G4 463 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 HS3ST5Q8IZT8 346 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 UPF1Q92900 1129 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 LPPQ93052 612 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 MBOAT4Q96T53 435 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 AIFM2Q9BRQ8 373 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ARL5AQ9Y689 179 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ENPP4Q9Y6X5 453 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 SOX14O95416 240 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 KLKB1P03952 638 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ENGP17813 658 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 GALP22466 123 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 AOAHP28039 575 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 AP3S2P59780 193 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 SNRPD1P62314 119 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RPS24P62847 133 aaKnown RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BEX3Q00994 111 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 GDF6Q6KF10 455 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 METAP1DQ6UB28 335 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 ARSKQ6UWY0 536 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 DNAJC22Q8N4W6 341 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 OR8K3Q8NH51 312 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM80Q96HE8 168 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 HYLS1Q96M11 299 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 BHLHE41Q9C0J9 482 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 RANBP3Q9H6Z4 567 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-205ENST00000397611 EXTL2Q9UBQ6 330 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 PCDHGC4Q9Y5F7 938 aa5.22□□□□□ -1.57
PTPRD-205ENST00000397611 MEIOCA2RUB1 952 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 SLC38A8A6NNN8 435 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 DISC1C4P0D8 188 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 TMX2-CTNND1H3BSU7 103 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 RNASET2O00584 256 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 ADAM23O75077 832 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 SLC25A14O95258 325 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 HMGA1P17096 107 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 NTSP30990 170 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 MLLT10P55197 1068 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 NAE1Q13564 534 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PDE7AQ13946 482 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 RAB33AQ14088 237 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 CYP27C1Q4G0S4 372 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PRAMEF8Q5VWM4 474 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PRAMEF7Q5VXH5 474 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 LIPKQ5VXJ0 399 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 CD300LDQ6UXZ3 194 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 CTU1Q7Z7A3 348 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PDXPQ96GD0 296 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 TSNAXQ99598 290 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 IKZF5Q9H5V7 419 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 ANKRD12Q6UB98 2062 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 WASH3PC4AMC7 463 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 GAPDHSO14556 408 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 KCNK5O95279 499 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PRKAR2AP13861 404 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 NPR2P20594 1047 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 SMAD3P84022 425 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 HEPACAMQ14CZ8 416 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 C4orf46Q504U0 113 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 FAM171A1Q5VUB5 890 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF765Q7L2R6 523 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PTOV1Q86YD1 416 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 NPAS3Q8IXF0 933 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 OR52N2Q8NGI0 321 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 PXYLP1Q8TE99 480 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 DUSP26Q9BV47 211 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 KLF16Q9BXK1 252 aaPredicted RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 CFHR5Q9BXR6 569 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 ACPTQ9BZG2 426 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 CTPS2Q9NRF8 586 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 TAS2R3Q9NYW6 316 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 GMPR2Q9P2T1 348 aaKnown RBP5.21□□□□□ -1.57
PTPRD-205ENST00000397611 DLGAP4Q9Y2H0 992 aa5.21□□□□□ -1.57
PTPRD-205ENST00000397611 KCNE1BA0A087WTH5 132 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FOXE1O00358 373 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 NME6O75414 186 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ANXA4P09525 319 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SCARB2Q14108 478 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 STEAP3Q658P3 488 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 UBE2R2Q712K3 238 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 NPAS4Q8IUM7 802 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CLIP3Q96DZ5 547 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FERD3LQ96RJ6 166 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CSF3RQ99062 836 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SGK2Q9HBY8 427 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ASAH2Q9NR71 780 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 DPP7Q9UHL4 492 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 OSGIN1Q9UJX0 560 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PCDHGA12O60330 932 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FCER2P06734 321 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SSTR4P31391 388 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms