RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SLC7A13Q8TCU3 470 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 ASZ1Q8WWH4 475 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 ZNF556Q9HAH1 456 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 CLN6Q9NWW5 311 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 CORO2BQ9UQ03 480 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 HS3ST2Q9Y278 367 aa13.25□□□□□ -0.29
NUP98-204ENST00000397004 A0A1W2PQL4 384 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 SEC14L5O43304 696 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 ITGA2P17301 1181 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 IRS1P35568 1242 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SNRPGP62308 76 aaKnown RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 TBPL1P62380 186 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 GPLD1P80108 840 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 DBPQ10586 325 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 ELAVL2Q12926 359 aaKnown RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 FAM209AQ5JX71 171 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 OR2G6Q5TZ20 316 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SAXO2Q658L1 398 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 KLHDC8AQ8IYD2 350 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 GPR65Q8IYL9 337 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SORCS1Q8WY21 1168 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 TMCO6Q96DC7 493 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 DMRT3Q9NQL9 472 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 DYRK4Q9NR20 520 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 PCYT1BQ9Y5K3 369 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 A0A1W2PQ45 241 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 A0A1W2PQY0 241 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 WASHC1A8K0Z3 465 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 DVL2O14641 736 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 IL3P08700 152 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 HSD3B1P14060 373 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 HSD3B2P26439 372 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 EFNB1P98172 346 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SP3Q02447 781 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 HENMT1Q5T8I9 393 aaKnown RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 PGBD2Q6P3X8 592 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 WASH2PQ6VEQ5 465 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
NUP98-204ENST00000397004 RAB43Q86YS6 212 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 LRRC56Q8IYG6 542 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 RDH10Q8IZV5 341 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SETD6Q8TBK2 473 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SCLYQ96I15 445 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 MSLNLQ96KJ4 702 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SF3B6Q9Y3B4 125 aaKnown RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 COL4A3Q01955 1670 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 HMX3A6NHT5 357 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 CTSLP07711 333 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 OSMP13725 252 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 GPC1P35052 558 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 RORCP51449 518 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 ZNF33BQ06732 778 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.29
NUP98-204ENST00000397004 ARMC4Q5T2S8 1044 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 ACSM5Q6NUN0 579 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 TECPR1Q7Z6L1 1165 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 ST13P5Q8NFI4 369 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 CAPNS2Q96L46 248 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 ZNF717Q9BY31 904 aaPredicted RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 POLR2J2Q9GZM3 115 aaKnown RBP13.24□□□□□ -0.29
NUP98-204ENST00000397004 KLHL20Q9Y2M5 609 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 DENND4CQ5VZ89 1909 aa13.24□□□□□ -0.29
NUP98-204ENST00000397004 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 LATS1O95835 1130 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 FAM157BP0CG42 384 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 SDC2P34741 201 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 MAPK8P45983 427 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 METAP1P53582 386 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 CD83Q01151 205 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 RBBP4Q09028 425 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 HNRNPA0Q13151 305 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 ILKQ13418 452 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 KCNC3Q14003 757 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 FAM83CQ9BQN1 747 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 STUB1Q9UNE7 303 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 CENPXA8MT69 81 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 RTCAO00442 366 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 BCHEP06276 602 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 SNRPD1P62314 119 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 RPS25P62851 125 aaKnown RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 TAF12Q16514 161 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 OR4M1Q8NGD0 313 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 OR52I1Q8NGK6 324 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 PDXPQ96GD0 296 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 TMEM80Q96HE8 168 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 FAM83DQ9H4H8 585 aa13.23□□□□□ -0.29
NUP98-204ENST00000397004 CRNNQ9UBG3 495 aaPredicted RBP13.23□□□□□ -0.29
NUP98-204ENST00000397004 TESQ9UGI8 421 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms