RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CNOT4O95628 575 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 HPNP05981 417 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TNNI3P19429 210 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 GDF1P27539 372 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 MAGEA6P43360 314 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SERTAD2Q14140 314 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 EFTUD2Q15029 972 aaKnown RBP eCLIP7.73□□□□□ -1.171e-6■■□□□ 14.4
SCFD1-202ENST00000396629 PRAMEF20Q5VT98 475 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 THOC6Q86W42 341 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 KLHDC8AQ8IYD2 350 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 C9orf106Q8NAJ2 232 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CALML6Q8TD86 181 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 LINGO1Q96FE5 620 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 PERPQ96FX8 193 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 WDYHV1Q96HA8 205 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TRIB1Q96RU8 372 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SERINC2Q96SA4 455 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TRIM54Q9BYV2 358 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 GSX2Q9BZM3 304 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TAS2R13Q9NYV9 303 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 DAPP1Q9UN19 280 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CAMK2AQ9UQM7 478 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 A0A088AWK7 358 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 SIAH2O43255 324 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 IPO7O95373 1038 aaKnown RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 TBX6O95947 436 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 FBXO45P0C2W1 286 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 TMIGD3P0DMS9 266 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 ZNF10P21506 573 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 SAT1P21673 171 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 CDK9P50750 372 aaKnown RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 SARNPP82979 210 aaKnown RBP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 STX4Q12846 297 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 RCN2Q14257 317 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 ADPRMQ3LIE5 342 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 HMBOX1Q6NT76 420 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 CASC4Q6P4E1 433 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 RAD9BQ6WBX8 426 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 TMPRSS11BQ86T26 416 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 C9orf40Q8IXQ3 194 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.72□□□□□ -1.17
SCFD1-202ENST00000396629 TTLQ8NG68 377 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 CCL19Q99731 98 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 COPS7AQ9UBW8 275 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 NDRG3Q9UGV2 375 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 MAD1L1Q9Y6D9 718 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 EXPH5Q8NEV8 1989 aa7.72□□□□□ -1.17
SCFD1-202ENST00000396629 PABPN1LA6NDY0 278 aaKnown RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 SDR42E2A6NKP2 422 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 CTIFO43310 598 aaKnown RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ACSL3O95573 720 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 IGKV3-11P04433 115 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ENO2P09104 434 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 MLNP12872 115 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 PAX1P15863 534 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 GSTM2P28161 218 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 PCYT1AP49585 367 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 MTTPP55157 894 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 CDKN2DP55273 166 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 FOXF2Q12947 444 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 TBCELQ5QJ74 424 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ABHD17CQ6PCB6 329 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 PODNL1Q6PEZ8 512 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 C20orf204Q6ZNR8 217 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 C7orf57Q8NEG2 295 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 OR2L5Q8NG80 312 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 OR10G3Q8NGC4 313 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 GABPB2Q8TAK5 448 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ZPLD1Q8TCW7 415 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 IGFBPL1Q8WX77 278 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ANKRD9Q96BM1 317 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 SENP5Q96HI0 755 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ZNF597Q96LX8 424 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 JSRP1Q96MG2 331 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 ZFP3Q96NJ6 502 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 RUNDC3BQ96NL0 473 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 NDNQ99608 321 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 DOHHQ9BU89 302 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 UGT2B28Q9BY64 529 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 UBQLN3Q9H347 655 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 NT5DC2Q9H857 520 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 C20orf96Q9NUD7 363 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-202ENST00000396629 SLC6A5Q9Y345 797 aa7.71□□□□□ -1.17
SCFD1-202ENST00000396629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-202ENST00000396629 LDB3O75112 727 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 H2AFYO75367 372 aaKnown RBP7.71□□□□□ -1.18
SCFD1-202ENST00000396629 CLEC3AO75596 197 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 RCBTB2O95199 551 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 LRATO95237 230 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 GUCA1CO95843 209 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 C1GALT1C1LP0DN25 315 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 CERS1P27544 350 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 SERPINB3P29508 390 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 SLCO1A2P46721 670 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 PTH2RP49190 550 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 PLA2G16P53816 162 aa7.71□□□□□ -1.18
SCFD1-202ENST00000396629 IL2P60568 153 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms