RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 OR7A17O14581 309 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 PROM1O43490 865 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 FGF17O60258 216 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 SEMA3DO95025 777 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 OTCP00480 354 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 FAM58BPP0C7Q3 252 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 NR2F6P10588 404 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 ALOX15P16050 662 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 COL8A1P27658 744 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 RNF4P78317 190 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 FOLH1Q04609 750 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 FRG2Q64ET8 278 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 C18orf63Q68DL7 685 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 OPN5Q6U736 354 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 IL20RBQ6UXL0 311 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 RPTNQ6XPR3 784 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 PAGE2Q7Z2X7 111 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF227Q86WZ6 799 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 SPPL2CQ8IUH8 684 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 OR52B6Q8NGF0 335 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 WDR20Q8TBZ3 569 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 SREK1Q8WXA9 508 aaKnown RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 FRG2BQ96QU4 278 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 RASL10BQ96S79 203 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 NTMT1Q9BV86 223 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 DDX31Q9H8H2 851 aaKnown RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 LIN28AQ9H9Z2 209 aaKnown RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-205ENST00000395794 PCTPQ9UKL6 214 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 ATG4BQ9Y4P1 393 aa12.77□□□□□ -0.37
CXCL12-205ENST00000395794 A0A0A6YYD5 115 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 IQANK1A0A1B0GTG1 560 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 PRRG2O14669 202 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 RIPK2O43353 540 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 PRKNO60260 465 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 EEDO75530 441 aaKnown RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 GPR75O95800 540 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 BSGP35613 385 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 DCTP40126 519 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SMSP52788 366 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 HK2P52789 917 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SGO1Q5FBB7 561 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 C16orf47Q6ZP98 133 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 RTL4Q6ZR62 310 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 MDGA2Q7Z553 956 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 MRGPRGQ86SM5 289 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 LCA5Q86VQ0 697 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 EID3Q8N140 333 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 PSD4Q8NDX1 1056 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 PPWD1Q96BP3 646 aaKnown RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 CCDC120Q96HB5 630 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SENP5Q96HI0 755 aaPredicted RBP12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SGCZQ96LD1 299 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 NMRK1Q9NWW6 199 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 SNX6Q9UNH7 406 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 ASB4Q9Y574 426 aa12.76□□□□□ -0.37
CXCL12-205ENST00000395794 MAST4O15021 2626 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 A0A1W2PR48 441 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 GLOD5A6NK44 160 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 TMEM200CA6NKL6 621 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ACOT7O00154 380 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 GUCY1B2O75343 617 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 OR6B1O95007 311 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ETHE1O95571 254 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 RFC3P40938 356 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 SOX3P41225 446 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
CXCL12-205ENST00000395794 GPR85P60893 370 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 PLGLB1Q02325 96 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ART3Q13508 389 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 SPTAN1Q13813 2472 aaKnown RBP12.75□□□□□ -0.37
CXCL12-205ENST00000395794 C3AR1Q16581 482 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 CCNYL2Q5T2Q4 361 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF787Q6DD87 383 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 OR52E8Q6IFG1 317 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 SLC29A4Q7RTT9 530 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF808Q8N4W9 903 aaPredicted RBP12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF321PQ8N8H1 164 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 OR4F6Q8NGB9 312 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 SLC22A8Q8TCC7 542 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 ZNF721Q8TF20 911 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 RIT1Q92963 219 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 FBXL20Q96IG2 436 aa12.75□□□□□ -0.37
CXCL12-205ENST00000395794 NSUN5Q96P11 429 aaKnown RBP12.75□□□□□ -0.37
CXCL12-205ENST00000395794 CNPPD1Q9BV87 410 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms