RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 PSMA8Q8TAA3 256 aa23.19■■□□□ 1.3
CTF1-202ENST00000395019 KLHL6Q8WZ60 621 aa23.19■■□□□ 1.3
CTF1-202ENST00000395019 PKP2Q99959 881 aa23.19■■□□□ 1.3
CTF1-202ENST00000395019 TACO1Q9BSH4 297 aaKnown RBP23.19■■□□□ 1.3
CTF1-202ENST00000395019 CXorf36Q9H7Y0 433 aa23.19■■□□□ 1.3
CTF1-202ENST00000395019 ANAPC2Q9UJX6 822 aa23.19■■□□□ 1.3
CTF1-202ENST00000395019 NUP214P35658 2090 aaPredicted RBP23.18■■□□□ 1.3
CTF1-202ENST00000395019 B4GAT1O43505 415 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 KRT75O95678 551 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 NTRK1P04629 796 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 IL10P22301 178 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 RUNX2Q13950 521 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 VMACQ2NL98 169 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 PRTGQ2VWP7 1150 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 PTOV1Q86YD1 416 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 ARHGEF39Q8N4T4 335 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 CNDP2Q96KP4 475 aaKnown RBP23.18■■□□□ 1.3
CTF1-202ENST00000395019 RAD21L1Q9H4I0 556 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 EPS8L2Q9H6S3 715 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 LYRM4Q9HD34 91 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 PRDM9Q9NQV7 894 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 GPATCH2Q9NW75 528 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 DAPP1Q9UN19 280 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 AURKCQ9UQB9 309 aa23.18■■□□□ 1.3
CTF1-202ENST00000395019 CPED1A4D0V7 1026 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 GLOD5A6NK44 160 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 WASHC1A8K0Z3 465 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 DUX1O43812 170 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 FOXD2O60548 495 aaPredicted RBP23.17■■□□□ 1.3
CTF1-202ENST00000395019 CREG1O75629 220 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 NR2F6P10588 404 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 NTSP30990 170 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 SOAT1P35610 550 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 BUD31P41223 144 aaPredicted RBP23.17■■□□□ 1.3
CTF1-202ENST00000395019 GABRA4P48169 554 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 LIM2P55344 173 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 TNFRSF17Q02223 184 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 ADRM1Q16186 407 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 PAPD5Q8NDF8 572 aaKnown RBP23.17■■□□□ 1.3
CTF1-202ENST00000395019 CCDC74AQ96AQ1 378 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 ZNF285Q96NJ3 590 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 GLIPR2Q9H4G4 154 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 SIRT3Q9NTG7 399 aaPredicted RBP23.17■■□□□ 1.3
CTF1-202ENST00000395019 MS4A12Q9NXJ0 267 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 UNC13CQ8NB66 2214 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 PCNX2A6NKB5 2137 aa23.17■■□□□ 1.3
CTF1-202ENST00000395019 IGHV5-51A0A0C4DH38 117 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 MYO1GB0I1T2 1018 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 GALR3O60755 368 aaPredicted RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 LDOC1O95751 146 aaPredicted RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 CKMT1AP12532 417 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 CPN2P22792 545 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 CHI3L1P36222 383 aaPredicted RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 VAC14Q08AM6 782 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 FADDQ13158 208 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 TBCELQ5QJ74 424 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.16■■□□□ 1.3
CTF1-202ENST00000395019 PIP4P1Q86T03 277 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 PLXDC1Q8IUK5 500 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 TMEM102Q8N9M5 508 aaPredicted RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 ZFP28Q8NHY6 868 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 POP5Q969H6 163 aaKnown RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 FAM162AQ96A26 154 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 AMDHD1Q96NU7 426 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 PDE7BQ9NP56 450 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 ACSL6Q9UKU0 697 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 PSME2Q9UL46 239 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 PLCL2Q9UPR0 1127 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 ENTPD4Q9Y227 616 aa23.16■■□□□ 1.3
CTF1-202ENST00000395019 PTPRZ1P23471 2315 aaPredicted RBP23.16■■□□□ 1.3
CTF1-202ENST00000395019 RNF103-CHMP3A0A140T963 221 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 HNRNPRO43390 633 aaKnown RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 ZBTB11O95625 1053 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 C9P02748 559 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 PNLIPP16233 465 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 MLLT3P42568 568 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 HSPB3Q12988 150 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 VEZF1Q14119 521 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 TRIP10Q15642 601 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 CEBPEQ15744 281 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 INAVAQ3KP66 663 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 PDSS2Q86YH6 399 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 Q8N9G6 341 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 OR6C4Q8NGE1 309 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 OR5AK3PQ8NH89 298 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 NCLNQ969V3 563 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 CNRIP1Q96F85 164 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 C10orf90Q96M02 699 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 BBS4Q96RK4 519 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 NPLQ9BXD5 320 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 STARD5Q9NSY2 213 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 FTSJ1Q9UET6 329 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 SNX8Q9Y5X2 465 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 COL27A1Q8IZC6 1860 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 EME2A4GXA9 379 aaPredicted RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 ERAL1O75616 437 aaKnown RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 CTSBP07858 339 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 CDK9P50750 372 aaKnown RBP23.15■■□□□ 1.3
CTF1-202ENST00000395019 DAB2P98082 770 aa23.15■■□□□ 1.3
CTF1-202ENST00000395019 CFHR1Q03591 330 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms