RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 XYLT2Q9H1B5 865 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 VRTNQ9H8Y1 702 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.81
COL4A6-203ENST00000394872 SEC14L5O43304 696 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 EPCAMP16422 314 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 FECHP22830 423 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 DCKP27707 260 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 RORAP35398 523 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 CDH15P55291 814 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 MEP1AQ16819 746 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 KCTD9Q7L273 389 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 AMIGO3Q86WK7 504 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM25Q86YD3 366 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 OR51G2Q8NGK0 314 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 OR8S1Q8NH09 359 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 AURKBQ96GD4 344 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 FBRSQ9HAH7 460 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ZBTB20Q9HC78 741 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 MOV10Q9HCE1 1003 aaKnown RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 STOX2Q9P2F5 926 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 PCDHGB6Q9Y5F9 930 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 PRLP01236 227 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ADORA3P0DMS8 318 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF35P13682 527 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ATF4P18848 351 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 CD70P32970 193 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 PITX1P78337 314 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 KCNC4Q03721 635 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 COL9A2Q14055 689 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 MINDY2Q8NBR6 621 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 GRPEL2Q8TAA5 225 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 THRSPQ92748 146 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 TEPSINQ96N21 525 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 RANBP9Q96S59 729 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 FUZQ9BT04 418 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 SARDHQ9UL12 918 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 KLHL33A6NCF5 533 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 A6NLC8 198 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 CTSAP10619 480 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ADRB3P13945 408 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 CD72P21854 359 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 SOX2P48431 317 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ACADVLP49748 655 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ST3GAL4Q11206 333 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 GRIK2Q13002 908 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 SLC35G1Q2M3R5 365 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ZBED5Q49AG3 693 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 UBE2Q1Q7Z7E8 422 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ZFAND4Q86XD8 727 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ZNF761Q86XN6 746 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM151BQ8IW70 566 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 ASB15Q8WXK1 588 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 NUDT15Q9NV35 164 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM59LQ9UK28 342 aa9.96□□□□□ -0.82
COL4A6-203ENST00000394872 KNDC1Q76NI1 1749 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 A0A096LPI6 279 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 SMIM30A4D0T7 59 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 PORP16435 677 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-203ENST00000394872 PTGS2P35354 604 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 SUOXP51687 545 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 TPTEP56180 551 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 MALLQ13021 153 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 PSAPL1Q6NUJ1 521 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 ERMP1Q7Z2K6 904 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 GALNT10Q86SR1 603 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 LAS2Q8IYD9 372 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 PGAM5Q96HS1 289 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 RADILQ96JH8 1075 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 FBRSL1Q9HCM7 1045 aaKnown RBP9.95□□□□□ -0.82
COL4A6-203ENST00000394872 HHATLQ9HCP6 504 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 A0A1B0GVC2 190 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 NTHL1P78549 312 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 GSTM4Q03013 218 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 GINS1Q14691 196 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 RUNDC3AQ59EK9 446 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 OGFRL1Q5TC84 451 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-203ENST00000394872 GLT8D1Q68CQ7 371 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 KCTD18Q6PI47 426 aaPredicted RBP9.95□□□□□ -0.82
COL4A6-203ENST00000394872 KLHDC10Q6PID8 442 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 RAB11FIP2Q7L804 512 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 SLC15A3Q8IY34 581 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 OR52P1PQ8NH57 321 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 C1orf21Q9H246 121 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 CACNA1FO60840 1977 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 SOCS2O14508 198 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 PPM1BO75688 479 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 HRGP04196 525 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM35AQ53FP2 167 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 C6orf136Q5SQH8 315 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 OR52E8Q6IFG1 317 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 TRIM73Q86UV7 250 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 ELP5Q8TE02 316 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 DIO2Q92813 273 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 LMAN1LQ9HAT1 526 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 TMEM184CQ9NVA4 438 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 GSKIPQ9P0R6 139 aa9.95□□□□□ -0.82
COL4A6-203ENST00000394872 SH2B3Q9UQQ2 575 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms