RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 HS3ST2Q9Y278 367 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 A0A0G2JMZ2 1700 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 LRRC37A2A6NM11 1700 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 FAM172BPA6NC97 362 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 TTC34A8MYJ7 566 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF10P21506 573 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 FUT4P22083 530 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 DDX6P26196 483 aaKnown RBP eCLIP11.13□□□□□ -0.633e-8■□□□□ 10.6
UBE2D3-209ENST00000394804 CTNNB1P35222 781 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZFP36L2P47974 494 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LARS2Q15031 903 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 TEAD2Q15562 447 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF311Q5JNZ3 666 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 AGAP6Q5VW22 663 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 KIAA1161Q6NSJ0 714 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC36A4Q6YBV0 504 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 KLHL36Q8N4N3 616 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 TTLQ8NG68 377 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 AGAP4Q96P64 663 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LYSMD1Q96S90 227 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PITX2Q99697 317 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 CENPOQ9BU64 300 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PHPT1Q9NRX4 125 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 RPS6KB2Q9UBS0 482 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 OR6C70A6NIJ9 312 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ANHXE9PGG2 379 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 J3KTA2 159 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 CTDSP2O14595 271 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 HLA-DPB1P04440 258 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ARAFP10398 606 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 C4BPBP20851 252 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LHCGRP22888 699 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 HLA-FP30511 346 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 CDH11P55287 796 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 C22orf42Q6IC83 251 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■■□ 20.8
UBE2D3-209ENST00000394804 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PTOV1Q86YD1 416 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PEX5LQ8IYB4 626 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SETD6Q8TBK2 473 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SMG7Q92540 1137 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LRR1Q96L50 414 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PCDHGA2Q9Y5H1 932 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GFRA2O00451 464 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ENTPD6O75354 484 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 OR12D1P0DN82 309 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 IMPA1P29218 277 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 RGS1Q08116 209 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GAB1Q13480 694 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LASP1Q14847 261 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 INAVAQ3KP66 663 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 RPS26P11Q5JNZ5 115 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 FAHD1Q6P587 224 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 LRRTM4Q86VH4 590 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 FAM83FQ8NEG4 500 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF480Q8WV37 535 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 TBC1D20Q96BZ9 403 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 F2RL3Q96RI0 385 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GABARAPL3Q9BY60 117 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PLCXD1Q9NUJ7 323 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 EXOSC1Q9Y3B2 195 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GFYI3L273 518 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PGRMC2O15173 223 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 APOL3O95236 402 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 GNRH1P01148 92 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 HTR1AP08908 422 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PCMT1P22061 227 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PRPH2P23942 346 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 CHMP24386 653 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SOX3P41225 446 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC14A1Q13336 389 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 WSCD2Q2TBF2 565 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 SDE2Q6IQ49 451 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 FAM180BQ6P0A1 224 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 OTOP2Q7RTS6 562 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 MCOLN1Q9GZU1 580 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF222Q9UK12 451 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 PRKAB1Q9Y478 270 aa11.13□□□□□ -0.63
UBE2D3-209ENST00000394804 HMGN1P05114 100 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 TNFSF8P32971 234 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 AVPR1BP47901 424 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 KCNJ10P78508 379 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC7A9P82251 487 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 NRSN1Q8IZ57 195 aa11.12□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC7A5P1Q8MH63 180 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms