RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TMEM245Q9H330 911 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 DYRK4Q9NR20 520 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 FTSJ1Q9UET6 329 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 HCN2Q9UL51 889 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ASF1AQ9Y294 204 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PCDHGA3Q9Y5H0 932 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ANKDD1BA6NHY2 528 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 QSOX1O00391 747 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 LINC01565O15544 149 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 KDM1AO60341 852 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 UPK1BO75841 260 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 CCNB2O95067 398 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ARAFP10398 606 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 TPTEP56180 551 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 FCHO2Q0JRZ9 810 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SELENBP1Q13228 472 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SSX1Q16384 188 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 NRSN1Q8IZ57 195 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 KIAA1958Q8N8K9 716 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 Q8N9G6 341 aaPredicted RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 TMIEQ8NEW7 156 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 STARD8Q92502 1023 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 MAGEB10Q96LZ2 347 aaPredicted RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PLCXD1Q9NUJ7 323 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ATAD3AQ9NVI7 634 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 C14orf119Q9NWQ9 140 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 TAC3Q9UHF0 121 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 POU2F3Q9UKI9 436 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 CORO2BQ9UQ03 480 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ENPP4Q9Y6X5 453 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PSMD11O00231 422 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SCAMP1O15126 338 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ZW10O43264 779 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 DPM1O60762 260 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ANXA8P13928 327 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ALOX12P18054 663 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PIK3CBP42338 1070 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 IRF3Q14653 427 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 NCCRP1Q6ZVX7 275 aaPredicted RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SZRD1Q7Z422 152 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 EXOSC8Q96B26 276 aaKnown RBP12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 CHFRQ96EP1 664 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 TMEM19Q96HH6 336 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 KXD1Q9BQD3 176 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SPATA9Q9BWV2 254 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 MYNNQ9NPC7 610 aa12.82□□□□□ -0.36
GTF2F1-201ENST00000394456 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 KIAA0513O60268 411 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 GPX5O75715 221 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 APOL3O95236 402 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PAPLNO95428 1278 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 CD72P21854 359 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 ACADLP28330 430 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 GJA4P35212 333 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 DSTNP60981 165 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 ZNF33BQ06732 778 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PCDH1Q08174 1060 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 CRB2Q5IJ48 1285 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 DEPDC1Q5TB30 811 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 TMIGD1Q6UXZ0 262 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 DEF8Q6ZN54 512 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PTCHD4Q6ZW05 846 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 C11orf96Q7Z7L8 435 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 OR5D16Q8NGK9 328 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 WDR36Q8NI36 951 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 GEMIN6Q8WXD5 167 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 POP5Q969H6 163 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 LGR4Q9BXB1 951 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 NKX2-4Q9H2Z4 354 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 TMEM38AQ9H6F2 299 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 MVB12BQ9H7P6 319 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 CCDC177Q9NQR7 707 aaPredicted RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 THSD1Q9NS62 852 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 TEX10Q9NXF1 929 aaPredicted RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 BRWD1Q9NSI6 2320 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 A0A0C4DFX4 3053 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 A0A1W2PS29 197 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 SMIM30A4D0T7 59 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 FOXE1O00358 373 aaPredicted RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 CYP7B1O75881 506 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 DLGAP3O95886 979 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 RPLP0P05388 317 aaKnown RBP12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 P2RY2P41231 377 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 LIMK1P53667 647 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PRAMEF14Q5SWL7 426 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 PRAMEF13Q5VWM6 474 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 FRMPD2BQ6IN97 320 aa12.81□□□□□ -0.36
GTF2F1-201ENST00000394456 TRIM40Q6P9F5 258 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms