RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ANKRD28O15084 1053 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 DCKP27707 260 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 PRLHRP49683 370 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 DAPP51397 102 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ZNF234Q14588 700 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 SLC5A12Q1EHB4 618 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 REEP3Q6NUK4 255 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ARMC6Q6NXE6 501 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 C8orf82Q6P1X6 216 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 ADAMTS16Q8TE57 1224 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 DOK4Q8TEW6 326 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 IPCEF1Q8WWN9 437 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 Q96MT0 163 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 LYSMD1Q96S90 227 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 FZD3Q9NPG1 666 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 PRDM8Q9NQV8 689 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 MS4A12Q9NXJ0 267 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 FBXL12Q9NXK8 326 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 GPR83Q9NYM4 423 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ZNF222Q9UK12 451 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 B3GNT3Q9Y2A9 372 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 NUPL2O15504 423 aaKnown RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ARHGEF15O94989 841 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 APOL3O95236 402 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ETHE1O95571 254 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 BTBD16Q32M84 506 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 IQCCQ4KMZ1 466 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 CLEC12AQ5QGZ9 265 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 COX20Q5RI15 118 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 OOSP2Q86WS3 158 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 RIMKLAQ8IXN7 391 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ADAMTS15Q8TE58 950 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 NARS2Q96I59 477 aaKnown RBP10.06□□□□□ -0.8
CALD1-203ENST00000393118 KCNK12Q9HB15 430 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 ABCB9Q9NP78 766 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 DMRT3Q9NQL9 472 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 STOML2Q9UJZ1 356 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
CALD1-203ENST00000393118 J3KTA2 159 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 MID1O15344 667 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 UGDHO60701 494 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 OR12D1P0DN82 309 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SMIM11AP58511 58 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SRP54P61011 504 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 SLC9A5Q14940 896 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 GGTA1PQ4G0N0 100 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CCDC116Q8IYX3 515 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 TMEM203Q969S6 136 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 LGALS12Q96DT0 336 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SPATA5L1Q9BVQ7 753 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 ITPAQ9BY32 194 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 MAFFQ9ULX9 164 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 H3BUI4 141 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 GFYI3L273 518 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 STK25O00506 426 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 PLOD3O60568 738 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 RASGRP1O95267 797 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CD40LGP29965 261 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CASP3P42574 277 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 AVPR1BP47901 424 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SLC6A12P48065 614 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 OLR1P78380 273 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 BNC1Q01954 994 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CTU2Q2VPK5 515 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 ZNF404Q494X3 552 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 ZNF691Q5VV52 312 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 ZNF852Q6ZMS4 543 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 ZNF730Q6ZMV8 503 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 TSPYL5Q86VY4 417 aaPredicted RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 PAPD5Q8NDF8 572 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 OR4E2Q8NGC2 313 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 KAT2AQ92830 837 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 C1GALT1C1Q96EU7 318 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SLC6A16Q9GZN6 736 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CPNE5Q9HCH3 593 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 NCKAP1Q9Y2A7 1128 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 AP3D1O14617 1153 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SCO1O75880 301 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SLCO2B1O94956 709 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 H1F0P07305 194 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 SRPRAP08240 638 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 MMP12P39900 470 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SELENOWP63302 87 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 TAP2Q03519 686 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 GAB1Q13480 694 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 HNRNPA1L2Q32P51 320 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 CBLL1Q75N03 491 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 B3GNT8Q7Z7M8 397 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 SLC38A6Q8IZM9 456 aa10.05□□□□□ -0.8
CALD1-203ENST00000393118 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 RPL3LQ92901 407 aaKnown RBP10.05□□□□□ -0.8
CALD1-203ENST00000393118 ART5Q96L15 291 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms