RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
SHOX-202ENST00000381575 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
SHOX-202ENST00000381575 GLOD5A6NK44 160 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 FAM90A27PA6NNH2 459 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 NPIPA2E9PIF3 369 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 NPIPA3F8WFD2 350 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SCELO95171 688 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 LRATO95237 230 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 C2P06681 752 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 CELA3AP09093 270 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 GFAPP14136 432 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 EPB42P16452 691 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 RPS13P62277 151 aaKnown RBP13.1□□□□□ -0.31
SHOX-202ENST00000381575 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 CAV1Q03135 178 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 FOLH1Q04609 750 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 ASPHQ12797 758 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 TMEM35AQ53FP2 167 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 EMC4Q5J8M3 183 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 GRHL2Q6ISB3 625 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 CHSY3Q70JA7 882 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 C9orf40Q8IXQ3 194 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
SHOX-202ENST00000381575 UCN3Q969E3 161 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 DGAT2Q96PD7 388 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SEMA4BQ9NPR2 832 aaPredicted RBP13.1□□□□□ -0.31
SHOX-202ENST00000381575 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 CPSF2Q9P2I0 782 aaKnown RBP13.1□□□□□ -0.31
SHOX-202ENST00000381575 COPS7AQ9UBW8 275 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 ATG4BQ9Y4P1 393 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 MTORP42345 2549 aa13.1□□□□□ -0.31
SHOX-202ENST00000381575 SETD2Q9BYW2 2564 aaPredicted RBP13.1□□□□□ -0.31
SHOX-202ENST00000381575 NKX2-6A6NCS4 301 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 EEDO75530 441 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 SIX3O95343 332 aaPredicted RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 PIGAP37287 484 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 MAGEA5P43359 124 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 NAB1Q13506 487 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 FAM219BQ5XKK7 198 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 MEX3BQ6ZN04 569 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 RTL4Q6ZR62 310 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 RGMAQ96B86 450 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 SENP5Q96HI0 755 aaPredicted RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 UCK2Q9BZX2 261 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 PNPLA3Q9NST1 481 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 ZNF358Q9NW07 568 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 TUBA8Q9NY65 449 aaPredicted RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 RNF11Q9Y3C5 154 aa13.09□□□□□ -0.31
SHOX-202ENST00000381575 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 HRNRQ86YZ3 2850 aaPredicted RBP13.09□□□□□ -0.31
SHOX-202ENST00000381575 A0A087X1B8 175 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 A0A096LPK6 155 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 A0A1W2PS29 197 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 SYCE1LA8MT33 242 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 ACOT7O00154 380 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 TMPRSS11DO60235 418 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 GBAP04062 536 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 COX7A2P14406 83 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 POU3F2P20265 443 aaPredicted RBP13.08□□□□□ -0.31
SHOX-202ENST00000381575 STT3AP46977 705 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 NEK2P51955 445 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.31
SHOX-202ENST00000381575 CPSF6Q16630 551 aaKnown RBP eCLIP13.08□□□□□ -0.31
SHOX-202ENST00000381575 FAM83EQ2M2I3 478 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 GOLGA7Q7Z5G4 137 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 GPR180Q86V85 440 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 PLD6Q8N2A8 252 aaKnown RBP13.08□□□□□ -0.31
SHOX-202ENST00000381575 TMEM251Q8N6I4 163 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 CDK15Q96Q40 435 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 FAM173AQ9BQD7 235 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 LRRC1Q9BTT6 524 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 CNPPD1Q9BV87 410 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 ZNF717Q9BY31 904 aaPredicted RBP13.08□□□□□ -0.31
SHOX-202ENST00000381575 VPS11Q9H270 941 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 TP63Q9H3D4 680 aaPredicted RBP13.08□□□□□ -0.31
SHOX-202ENST00000381575 ZDHHC11Q9H8X9 412 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 ZDHHC18Q9NUE0 388 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 COQ3Q9NZJ6 369 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 ITGB1BP2Q9UKP3 347 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 RNF6Q9Y252 685 aa13.08□□□□□ -0.31
SHOX-202ENST00000381575 ATP6AP2A0A1C7CYW4 349 aa13.07□□□□□ -0.32
SHOX-202ENST00000381575 ATP6AP2O75787 350 aa13.07□□□□□ -0.32
SHOX-202ENST00000381575 GLSO94925 669 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms