RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 HAS2Q92819 552 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 MACROD1Q9BQ69 325 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 RBCK1Q9BYM8 510 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 VN1R1Q9GZP7 353 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 ABI3Q9P2A4 366 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 TRIM33Q9UPN9 1127 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 NPIPB8E9PQR5 432 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 MANBAO00462 879 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 PRAMEF2O60811 474 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 SERPINA6P08185 405 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 HRH2P25021 359 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 EPHA3P29320 983 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 XCR1P46094 333 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 CASP6P55212 293 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 IRX1P78414 480 aaPredicted RBP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 PMP22Q01453 160 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 FAM53BQ14153 422 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 CPSF6Q16630 551 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LSM12Q3MHD2 195 aaKnown RBP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 FRG2Q64ET8 278 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 FAM91A1Q658Y4 838 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LARP4Q71RC2 724 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 TRPM8Q7Z2W7 1104 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 DDIASQ8IXT1 998 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LAS2Q8IYD9 372 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 OR4K1Q8NGD4 311 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 CCT6BQ92526 530 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 UBE2E3Q969T4 207 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 REPS1Q96D71 796 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LRRC37BQ96QE4 947 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 FRG2BQ96QU4 278 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 SH2B3Q9UQQ2 575 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 ENTPD4Q9Y227 616 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LOC102723996A0A087X1L8 192 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 SGK494L7N484 410 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 SLC28A1O00337 649 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 HSD3B1P14060 373 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 HSD3B2P26439 372 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 GRK3P35626 688 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 HTR6P50406 440 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 TDGF1P3P51864 188 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 IFT88Q13099 833 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 TCHHL1Q5QJ38 904 aaPredicted RBP12.9□□□□□ -0.34
PRPF18-202ENST00000378572 CATSPEREQ5SY80 951 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 MED27Q6P2C8 311 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
PRPF18-202ENST00000378572 AMER2Q8N7J2 671 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 WDR20Q8TBZ3 569 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 C3orf30Q96M34 536 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 ELOVL6Q9H5J4 265 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 PPT2Q9UMR5 302 aa12.9□□□□□ -0.34
PRPF18-202ENST00000378572 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 A0A1W2PQ72 361 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 FEZF1A0PJY2 475 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CCT8L1PA6NM43 557 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 H0YIG0 161 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CCL21O00585 134 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 RDH16O75452 317 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 NSA2O95478 260 aaKnown RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 SERPIND1P05546 499 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CDH1P12830 882 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 PRPH2P23942 346 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CCR8P51685 355 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ACTN3Q08043 901 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 SLBPQ14493 270 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ABRAXAS2Q15018 415 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 ZNF766Q5HY98 468 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
PRPF18-202ENST00000378572 HIST2H2AA3Q6FI13 130 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 Q6ZSR9 355 aa12.89□□□□□ -0.35
PRPF18-202ENST00000378572 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms