RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 DPPA4Q7L190 304 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 DDX53Q86TM3 631 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 GATAD2AQ86YP4 633 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TRAPPC5Q8IUR0 188 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 MMAAQ8IVH4 418 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 IQCF1Q8N6M8 205 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ACAT2Q9BWD1 397 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 PLAGL1Q9UM63 463 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ANKDD1BA6NHY2 528 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 LILRB5O75023 590 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 MFN2O95140 757 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 C8AP07357 584 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ENDOUP21128 410 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 MXD1Q05195 221 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ILKQ13418 452 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TCEANCQ8N8B7 351 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 MTERF3Q96E29 417 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TSSK6Q9BXA6 273 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 OR2AG1Q9H205 316 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ASAH2Q9NR71 780 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TMCC3Q9ULS5 477 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TSPAN11A1L157 253 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 HEPACAM2A8MVW5 462 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 CCL16O15467 120 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 SEMA3DO95025 777 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TBX6O95947 436 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 SOD1P00441 154 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 CYP17A1P05093 508 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 PTPN2P17706 415 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 S100A1P23297 94 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ALDH9A1P49189 494 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 DGKGP49619 791 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 XKP51811 444 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF805Q5CZA5 627 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TMEM201Q5SNT2 666 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 C12orf73Q69YU5 71 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF544Q6NX49 715 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 UNC5DQ6UXZ4 953 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TMPRSS11AQ6ZMR5 421 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 IRF7Q92985 503 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TMCO6Q96DC7 493 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 VWCEQ96DN2 955 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 POLR2J2Q9GZM3 115 aaKnown RBP12.57□□□□□ -0.4
ACTN1-202ENST00000376839 TIGARQ9NQ88 270 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 NDOR1Q9UHB4 597 aa12.57□□□□□ -0.4
ACTN1-202ENST00000376839 RGS13O14921 159 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PLD2O14939 933 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 IDH3BO43837 385 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 TPST2O60704 377 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 LILRB3O75022 631 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 CHRM5P08912 532 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PSMA1P25786 263 aaKnown RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PSPHP78330 225 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 TAB1Q15750 504 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 UAP1L1Q3KQV9 507 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 DCST1Q5T197 706 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SAXO2Q658L1 398 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PGBD2Q6P3X8 592 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF517Q6ZMY9 492 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 COMTD1Q86VU5 262 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 GPR65Q8IYL9 337 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PXYLP1Q8TE99 480 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 NEURL3Q96EH8 262 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 CCDC177Q9NQR7 707 aaPredicted RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SPATA7Q9P0W8 599 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SEC14L4Q9UDX3 406 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 STUB1Q9UNE7 303 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 MTCL1Q9Y4B5 1905 aaKnown RBP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 A0A1W2PQ09 198 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 PLPP1O14494 284 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 SYN1P17600 705 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 HOXD10P28358 340 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 MAPK9P45984 424 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 RORCP51449 518 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 DEFB103AP81534 67 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN1-202ENST00000376839 HSPB3Q12988 150 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 ARMC4Q5T2S8 1044 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 MEDAGQ5VYS4 303 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 TMIGD1Q6UXZ0 262 aa12.56□□□□□ -0.4
ACTN1-202ENST00000376839 NANOGP1Q8N7R0 232 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms