RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CNIH2Q6PI25 160 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF783Q6ZMS7 281 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 CREB3L2Q70SY1 520 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 TM9SF2Q99805 663 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 RSPO3Q9BXY4 272 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 BRF2Q9HAW0 419 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 GALNT9Q9HCQ5 603 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ING3Q9NXR8 418 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 TVP23BQ9NYZ1 205 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 FAM240BA0A1B0GVZ2 78 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 SAP18O00422 153 aaKnown RBP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ARAFP10398 606 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF30P17039 623 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 EVI2BP34910 448 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 HEPACAMQ14CZ8 416 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 OR2G6Q5TZ20 316 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF730Q6ZMV8 503 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 GTPBP2Q9BX10 602 aaKnown RBP15.72■□□□□ 0.11
TRIM39-201ENST00000376656 PPP1R3EQ9H7J1 279 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 HCN2Q9UL51 889 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 IGLV3-16A0A075B6K0 115 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 WASHC1A8K0Z3 465 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 ARHGEF33A8MVX0 844 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 SLC16A5O15375 505 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 PRKYO43930 277 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 POU3F3P20264 500 aaPredicted RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 LHCGRP22888 699 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 IRS1P35568 1242 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 PTSQ03393 145 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 CDH18Q13634 790 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 SPIN4Q56A73 249 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 LRRC73Q5JTD7 316 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TAS1R1Q7RTX1 841 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TMEM145Q8NBT3 493 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 OR8J1Q8NGP2 316 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 C19orf43Q9BQ61 176 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 NARFLQ9H6Q4 476 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 SATB2Q9UPW6 733 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 ANGPT4Q9Y264 503 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 KIAA1671Q9BY89 1806 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 LOC102723532A0A0G2JNH3 316 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TLX2O43763 284 aaPredicted RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 HCN1O60741 890 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 HPGDSO60760 199 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TRIM3O75382 744 aaPredicted RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 EOMESO95936 686 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 HSD3B1P14060 373 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TNNI3P19429 210 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 HSD3B2P26439 372 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 STK19P49842 368 aaPredicted RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 CYP4F8P98187 520 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 MBTPS1Q14703 1052 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 CRTC2Q53ET0 693 aaPredicted RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 ESCO2Q56NI9 601 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 IER5LQ5T953 404 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 FAM180BQ6P0A1 224 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 SLC24A5Q71RS6 500 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 DUSP18Q8NEJ0 188 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 TM9SF4Q92544 642 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 CLP1Q92989 425 aaKnown RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 ZC3HAV1LQ96H79 300 aaKnown RBP15.71■□□□□ 0.11
TRIM39-201ENST00000376656 BRD9Q9H8M2 597 aa15.71■□□□□ 0.11
TRIM39-201ENST00000376656 KPNA5O15131 536 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 LYRM1O43325 122 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 PROM1O43490 865 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 BNIP3LO60238 219 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 TSC22D2O75157 780 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 HLA-DQB1P01920 261 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 MYL12AP19105 171 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 ELAVL4P26378 380 aaKnown RBP15.71■□□□□ 0.1
TRIM39-201ENST00000376656 NUDT1P36639 197 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 CLDN20P56880 219 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 RAB25P57735 213 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 RRAS2P62070 204 aaPredicted RBP15.71■□□□□ 0.1
TRIM39-201ENST00000376656 AGTRAPQ6RW13 159 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 DCAF4L2Q8NA75 395 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 QRFPRQ96P65 431 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 KLF16Q9BXK1 252 aaPredicted RBP15.71■□□□□ 0.1
TRIM39-201ENST00000376656 POLR2J3Q9H1A7 115 aaKnown RBP15.71■□□□□ 0.1
TRIM39-201ENST00000376656 SPEF1Q9Y4P9 236 aa15.71■□□□□ 0.1
TRIM39-201ENST00000376656 ARSBP15848 533 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 WEE1P30291 646 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 WDR5P61964 334 aaKnown RBP15.7■□□□□ 0.1
TRIM39-201ENST00000376656 LRRC74AQ0VAA2 488 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 PLEKHS1Q5SXH7 462 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 RNLSQ5VYX0 342 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 MZT2BQ6NZ67 158 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 LAPTM4BQ86VI4 370 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 RBM45Q8IUH3 476 aaKnown RBP15.7■□□□□ 0.1
TRIM39-201ENST00000376656 APOBEC4Q8WW27 367 aaKnown RBP15.7■□□□□ 0.1
TRIM39-201ENST00000376656 METTL2AQ96IZ6 378 aaKnown RBP15.7■□□□□ 0.1
TRIM39-201ENST00000376656 MARCH5Q9NX47 278 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 DIMT1Q9UNQ2 313 aaKnown RBP15.7■□□□□ 0.1
TRIM39-201ENST00000376656 FRMPD3Q5JV73 1810 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 PLOD3O60568 738 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 GPR37L1O60883 481 aa15.7■□□□□ 0.1
TRIM39-201ENST00000376656 SOCS5O75159 536 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms