RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 IGKV3-11P04433 115 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 P04436 131 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 CPN2P22792 545 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 GP5P40197 560 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ADH7P40394 386 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 DLX5P56178 289 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ILF2Q12905 390 aaKnown RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 SLC10A1Q14973 349 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ZNF791Q3KP31 576 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 B3GNT6Q6ZMB0 384 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 LRRC70Q7Z2Q7 622 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ISCA2Q86U28 154 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 C9orf40Q8IXQ3 194 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 NUBPLQ8TB37 319 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 DOK4Q8TEW6 326 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 SENP5Q96HI0 755 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-204ENST00000376491 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 OR51B5Q9H339 312 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 SAYSD1Q9NPB0 183 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 Q9UFV3 132 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 KCNN3Q9UGI6 736 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 RNF112Q9ULX5 631 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
CLCN6-204ENST00000376491 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 SUSD5O60279 629 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 FAM155BO75949 473 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 RFPL3SP0C7P2 107 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 PCNAP12004 261 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 STT3AP46977 705 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 MAN2A2P49641 1150 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 GPX6P59796 221 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 RAB10P61026 200 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 GNG11P61952 73 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 PCDH1Q08174 1060 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 SLAMF1Q13291 335 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 TMEM35AQ53FP2 167 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 MED27Q6P2C8 311 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 CYS1Q717R9 158 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 TMEM200AQ86VY9 491 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 OR7G3Q8NG95 312 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 CDKL2Q92772 493 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 ATOH8Q96SQ7 321 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 ALG9Q9H6U8 611 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 LDAHQ9H6V9 325 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 SPRR3Q9UBC9 169 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.78□□□□□ -0.2
CLCN6-204ENST00000376491 SPACA6W5XKT8 324 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 MPDZO75970 2070 aa13.78□□□□□ -0.2
CLCN6-204ENST00000376491 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 WASHC1A8K0Z3 465 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 UBXN8O00124 270 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 WDR1O75083 606 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 PRKRAO75569 313 aaKnown RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 S100BP04271 92 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 SLC35E2BP0CK96 405 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 DNAJA1P31689 397 aaKnown RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 SSR2P43308 183 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 ART1P52961 327 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 FOLH1Q04609 750 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 MYBPHQ13203 477 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 C1orf185Q5T7R7 199 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 DEPDC1Q5TB30 811 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 PRAMEF20Q5VT98 475 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 KHDRBS2Q5VWX1 349 aaKnown RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 CES4AQ5XG92 561 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 SLC22A10Q63ZE4 541 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 C18orf63Q68DL7 685 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 OR4C11Q6IEV9 310 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 C3orf62Q6ZUJ4 267 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 CHSY3Q70JA7 882 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 CMC1Q7Z7K0 106 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 CLYBLQ8N0X4 340 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 STAG3L4Q8TBR4 150 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 PAQR8Q8TEZ7 354 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 UBTD2Q8WUN7 234 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 UBE2E3Q969T4 207 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 SARAFQ96BY9 339 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 SPACA9Q96E40 222 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 CMTM7Q96FZ5 175 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 NAPGQ99747 312 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 DPH5Q9H2P9 285 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 RPF2Q9H7B2 306 aaKnown RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 ZNF703Q9H7S9 590 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-204ENST00000376491 ALKBH4Q9NXW9 302 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 NUDT4Q9NZJ9 180 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 L3MBTL1Q9Y468 752 aa13.77□□□□□ -0.21
CLCN6-204ENST00000376491 LRRC3CA6NJW4 275 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms