RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SLAMF7Q9NQ25 335 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 SAGE1Q9NXZ1 904 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 DNAJC27Q9NZQ0 273 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 CLEC2DQ9UHP7 191 aa13.84□□□□□ -0.19
MSH5-201ENST00000375703 A0A075B6Q4 140 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 ELAVL4P26378 380 aaKnown RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 TNFSF8P32971 234 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 NCF4Q15080 339 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 LRIT3Q3SXY7 679 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 CASP12Q6UXS9 341 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 C6orf120Q7Z4R8 191 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 ADGRF3Q8IZF5 1079 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 VANGL1Q8TAA9 524 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 RAD51AP1Q96B01 352 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 NUS1Q96E22 293 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 F2RL3Q96RI0 385 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 SDHCQ99643 169 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 RSPO3Q9BXY4 272 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 C14orf119Q9NWQ9 140 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 A8MU76 341 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 SEMA7AO75326 666 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 PAPLNO95428 1278 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 H1F0P07305 194 aaKnown RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 RHOP08100 348 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 TIE1P35590 1138 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 RPS19P39019 145 aaKnown RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 SOX3P41225 446 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 XKP51811 444 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 CNTN1Q12860 1018 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 HSPB3Q12988 150 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 SPHARQ15513 63 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 DEFB115Q30KQ5 88 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 MEDAGQ5VYS4 303 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 SLX4IPQ5VYV7 408 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 DEF8Q6ZN54 512 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 RBM45Q8IUH3 476 aaKnown RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 FLCNQ8NFG4 579 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 OR5AR1Q8NGP9 310 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 OR2L2Q8NH16 312 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 ZNF514Q96K75 400 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 LINC00615Q96LM1 132 aaPredicted RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
MSH5-201ENST00000375703 TBX21Q9UL17 535 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 PRKAB1Q9Y478 270 aa13.83□□□□□ -0.2
MSH5-201ENST00000375703 HELZP42694 1942 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 PDPK1O15530 556 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 RGS5O15539 181 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 SPINT1O43278 529 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 DYRK3O43781 588 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 MMP20O60882 483 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 OXSR1O95747 527 aaPredicted RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 CASP3P42574 277 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 HEPACAMQ14CZ8 416 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 KHDRBS2Q5VWX1 349 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 SPATC1Q76KD6 591 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 KRT73Q86Y46 540 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 PPP1R16AQ96I34 528 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 ZSWIM3Q96MP5 696 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 CCDC32Q9BV29 185 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 C3orf14Q9HBI5 128 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 PAK6Q9NQU5 681 aaPredicted RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 DYRK4Q9NR20 520 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 C5AR2Q9P296 337 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 KLHL3Q9UH77 587 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 RPL36Q9Y3U8 105 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 PRRC2BQ5JSZ5 2229 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 FAAHO00519 579 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 CSO75390 466 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 PDE9AO76083 593 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 FGF19O95750 216 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 TBX6O95947 436 aaPredicted RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 KELP23276 732 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 PSMA1P25786 263 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 EPHA5P54756 1037 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 BCL2A1Q16548 175 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 FAM83HQ6ZRV2 1179 aaPredicted RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 C17orf64Q86WR6 236 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 NATD1Q8N6N6 113 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 CELF2-AS1Q8N7Q2 184 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 ST13P5Q8NFI4 369 aaPredicted RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 IL17RDQ8NFM7 739 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 ZNF354BQ96LW1 612 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 TEFMQ96QE5 360 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 CTRCQ99895 268 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 HOXD1Q9GZZ0 328 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 NDOR1Q9UHB4 597 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 GPR34Q9UPC5 381 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 LSM2Q9Y333 95 aaKnown RBP13.82□□□□□ -0.2
MSH5-201ENST00000375703 SNX11Q9Y5W9 270 aa13.82□□□□□ -0.2
MSH5-201ENST00000375703 PRNPP04156 253 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 BSGP35613 385 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 KCNJ5P48544 419 aa13.81□□□□□ -0.2
MSH5-201ENST00000375703 TARDBPQ13148 414 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms