RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
LSM2-208ENST00000375661 PRRG2O14669 202 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 BIRC5O15392 142 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 ATP8B1O43520 1251 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 NPHS1O60500 1241 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 CLEC3AO75596 197 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SERPIND1P05546 499 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SP1P08047 785 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SERPINA6P08185 405 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 PCNAP12004 261 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 GSTM2P28161 218 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 NAA20P61599 178 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MAT1AQ00266 395 aaKnown RBP11.37□□□□□ -0.59
LSM2-208ENST00000375661 ASPHQ12797 758 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MINDY4Q4G0A6 757 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 CFAP157Q5JU67 520 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MFSD4BQ5TF39 518 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MEX3BQ6ZN04 569 aaKnown RBP11.37□□□□□ -0.59
LSM2-208ENST00000375661 GPRIN3Q6ZVF9 776 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 DOLPP1Q86YN1 238 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 CRLF3Q8IUI8 442 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 RNF175Q8N4F7 328 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 TRPV3Q8NET8 790 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 TTLQ8NG68 377 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 WDR20Q8TBZ3 569 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MGARPQ8TDB4 240 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 CA5BP1Q8WTZ4 195 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 SEC16BQ96JE7 1060 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 TNFRSF12AQ9NP84 129 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 MID1IP1Q9NPA3 183 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 KLHL1Q9NR64 748 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 TRPS1Q9UHF7 1281 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 TSC22D4Q9Y3Q8 395 aa11.37□□□□□ -0.59
LSM2-208ENST00000375661 LRIT2A6NDA9 550 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 ANKDD1BA6NHY2 528 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 GABRR3A8MPY1 467 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 C4orf51C9J302 202 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 ESRRBO95718 433 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 CHRNGP07510 517 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SLC35G6P0C7Q6 338 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 IL10P22301 178 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 HPDP32754 393 aaPredicted RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 ARL1P40616 181 aaPredicted RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 PIK3CBP42338 1070 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 NEK2P51955 445 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 FOXA1P55317 472 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 PKNOX1P55347 436 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 TAS2R50P59544 299 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 RGS1Q08116 209 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 CHI3L2Q15782 390 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 ADPRMQ3LIE5 342 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 TCHHL1Q5QJ38 904 aaPredicted RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 HHATQ5VTY9 493 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 FCRLBQ6BAA4 426 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SPINK14Q6IE38 97 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SLC25A25Q6KCM7 469 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 LANCL3Q6ZV70 420 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 PRSS41Q7RTY9 318 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 GALNTL5Q7Z4T8 443 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 ANKRD37Q7Z713 158 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 AFAP1L2Q8N4X5 818 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 CDYL2Q8N8U2 506 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 OR9A4Q8NGU2 314 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 OR51Q1Q8NH59 317 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 HUS1BQ8NHY5 278 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 ZCCHC10Q8TBK6 192 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 UTP15Q8TED0 518 aaKnown RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 CCT6BQ92526 530 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SDCCAG3Q96C92 435 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 KCNA7Q96RP8 456 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 LPAR4Q99677 370 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 PAIP2Q9BPZ3 127 aaKnown RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 MS4A8Q9BY19 250 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SHCBP1LQ9BZQ2 653 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 DMRT3Q9NQL9 472 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 STK38LQ9Y2H1 464 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 PCDHGA11Q9Y5H2 935 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 PHF3Q92576 2039 aaKnown RBP11.36□□□□□ -0.59
LSM2-208ENST00000375661 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
LSM2-208ENST00000375661 IGHV3-20A0A0C4DH32 117 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 MAGEB17A8MXT2 336 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ADAM10O14672 748 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ITM2AO43736 263 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 NEURL1O76050 574 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 B3GALT4O96024 378 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ZNF24P17028 368 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 IGFBP2P18065 325 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 BGNP21810 368 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 SERPINB1P30740 379 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 HNRNPH1P31943 449 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 XCR1P46094 333 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 RPS13P62277 151 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms