RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 SLC6A12P48065 614 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 PIN1Q13526 163 aaPredicted RBP12.55□□□□□ -0.4
CUL4A-203ENST00000375441 ZSWIM7Q19AV6 140 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 FAHD1Q6P587 224 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 CELF5Q8N6W0 485 aaKnown RBP12.55□□□□□ -0.4
CUL4A-203ENST00000375441 LRRC17Q8N6Y2 441 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 TFGQ92734 400 aaPredicted RBP12.55□□□□□ -0.4
CUL4A-203ENST00000375441 OMA1Q96E52 524 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 PSD2Q9BQI7 771 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 NEUROD4Q9HD90 331 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
CUL4A-203ENST00000375441 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 SLC9A3R1O14745 358 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 TEX28O15482 410 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 CAPN5O15484 640 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 RB1P06400 928 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 BMP7P18075 431 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 HOXA9P31269 272 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 PPM1AP35813 382 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 AVPR1BP47901 424 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 GBX1Q14549 363 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 NXPE4Q6UWF7 544 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 AMZ2Q86W34 360 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 ZNF480Q8WV37 535 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 NUFIP1Q9UHK0 495 aaKnown RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 H7BY64 318 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 WWP2O00308 870 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 MMP20O60882 483 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 MTAPQ13126 283 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 GDPD3Q7L5L3 318 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 LHFPL3Q86UP9 236 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 OR52L1Q8NGH7 329 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 GATAD2BQ8WXI9 593 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 OR5P2Q8WZ92 322 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 NUS1Q96E22 293 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 TRMT61BQ9BVS5 477 aaKnown RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 KCNK12Q9HB15 430 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 CNOT2Q9NZN8 540 aaKnown RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 TMEM98Q9Y2Y6 226 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 TRBV5-3A0A0A0MS03 114 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 TMEM202A6NGA9 273 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 A6NL46 340 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 NOTOA8MTQ0 251 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 ORC5O43913 435 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 IMPA1P29218 277 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 SSTR4P31391 388 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 LASP1Q14847 261 aaKnown RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 PIGXQ8TBF5 258 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 ADAMTS15Q8TE58 950 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-203ENST00000375441 IRF7Q92985 503 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 RFKQ969G6 155 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 ARMC5Q96C12 935 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 NELL2Q99435 816 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 YIPF2Q9BWQ6 316 aa12.54□□□□□ -0.4
CUL4A-203ENST00000375441 A0A1W2PQ09 198 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 CHST10O43529 356 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 CSTF1Q05048 431 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TGM3Q08188 693 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 RAB33AQ14088 237 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TRIM71Q2Q1W2 868 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 ASB18Q6ZVZ8 466 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 METTL2AQ96IZ6 378 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TBX5Q99593 518 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 PITX2Q99697 317 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 RACGAP1Q9H0H5 632 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 C3orf14Q9HBI5 128 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 DMRT3Q9NQL9 472 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 ZNF638Q14966 1978 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 FAM170BA6NMN3 283 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 M0R082 166 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 C1QCP02747 245 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 CELP19835 753 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 PTNP21246 168 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 CCR8P51685 355 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 RAB14P61106 215 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 MEDAGQ5VYS4 303 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 PLPP4Q5VZY2 271 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 SMARCD3Q6STE5 483 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 SHFQ7M4L6 423 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 RASGEF1AQ8N9B8 481 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 ZNF514Q96K75 400 aaPredicted RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
CUL4A-203ENST00000375441 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
CUL4A-203ENST00000375441 TRBV4-1A0A0J9YWV2 114 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms