RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TFPTP0C1Z6 253 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 OR12D1P0DN82 309 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PKLRP30613 574 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 LIM2P55344 173 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PCBP4P57723 403 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 RPE65Q16518 533 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 SYPL1Q16563 259 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 UAP1L1Q3KQV9 507 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 SAXO2Q658L1 398 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 KIAA1161Q6NSJ0 714 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 XAGE5Q8WWM1 108 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 GEMIN6Q8WXD5 167 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 OR5P2Q8WZ92 322 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PROX1Q92786 737 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 TSACCQ96A04 125 aaPredicted RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 NEURL3Q96EH8 262 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 ARMC7Q9H6L4 198 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 KCNK12Q9HB15 430 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 ACER3Q9NUN7 267 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 TRPC4Q9UBN4 977 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 TBC1D29Q9UFV1 150 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC17A4Q9Y2C5 497 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 TPRKBQ9Y3C4 175 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 FAM32AQ9Y421 112 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 HMGN4O00479 90 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 LCKP06239 509 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 C21orf33P30042 268 aaPredicted RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 TGFBR1P36897 503 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 CCT3P49368 545 aaKnown RBP15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 LRRC32Q14392 662 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 MICAQ29983 383 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 ENPP7Q6UWV6 458 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 CCDC103Q8IW40 242 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 FRMD1Q8N878 549 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 RAB2BQ8WUD1 216 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 RORBQ92753 470 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 GLIPR2Q9H4G4 154 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 DUSP21Q9H596 190 aa15.16■□□□□ 0.02
CNKSR1-202ENST00000374253 PRAMEF27A3QJZ7 478 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ISM1B1AKI9 464 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ANHXE9PGG2 379 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 CACNB4O00305 520 aaPredicted RBP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 TOR1BO14657 336 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 FFAR1O14842 300 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 MAGEB3O15480 346 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 SEMA7AO75326 666 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 GADD45GO95257 159 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 BCL10O95999 233 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ITIH1P19827 911 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 POU1F1P28069 291 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 XCR1P46094 333 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 DUSP2Q05923 314 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 SLAMF1Q13291 335 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 MAPK11Q15759 364 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 GPR19Q15760 415 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 LEXMQ3ZCV2 418 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 C18orf63Q68DL7 685 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 CCDC80Q76M96 950 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 GPR32P1Q8NGA4 272 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 PHF10Q8WUB8 498 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF566Q969W8 418 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 PIP5K1AQ99755 562 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 KLHL25Q9H0H3 589 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 PSME2Q9UL46 239 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 NAALAD2Q9Y3Q0 740 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ATG4BQ9Y4P1 393 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 J3QRK9 145 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 RGS10O43665 173 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 SLC28A2O43868 658 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 TPST2O60704 377 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 CERS1P27544 350 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 FEN1P39748 380 aaKnown RBP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 NCBP2P52298 156 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 DMPKQ09013 629 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 HYAL2Q12891 473 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 TUBA3CQ13748 450 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 DEF8Q6ZN54 512 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 P3H2Q8IVL5 708 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 AQP11Q8NBQ7 271 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 OR2L3Q8NG85 312 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 HRASLS5Q96KN8 279 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ZNF347Q96SE7 839 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 TIMM29Q9BSF4 260 aa15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 ARHGEF17Q96PE2 2063 aaPredicted RBP15.15■□□□□ 0.02
CNKSR1-202ENST00000374253 A0A0A6YYD5 115 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 TRBV4-1A0A0J9YWV2 114 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 IFNW1P05000 195 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 JUNDP17535 347 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ACSL1P33121 698 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 AGERQ15109 404 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 SDE2Q6IQ49 451 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 KIAA1324Q6UXG2 1013 aaKnown RBP15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 TRIM73Q86UV7 250 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 COMTD1Q86VU5 262 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 ARMC8Q8IUR7 673 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 LACC1Q8IV20 430 aa15.14■□□□□ 0.01
CNKSR1-202ENST00000374253 CCDC116Q8IYX3 515 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms