RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 RUVBL1Q9Y265 456 aaKnown RBP13.59□□□□□ -0.23
HMGA1-203ENST00000374116 PCDHGA11Q9Y5H2 935 aa13.59□□□□□ -0.23
HMGA1-203ENST00000374116 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
HMGA1-203ENST00000374116 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 CREG1O75629 220 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 LDOC1O95751 146 aaPredicted RBP13.58□□□□□ -0.24
HMGA1-203ENST00000374116 SLC16A8O95907 504 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 HPRP00739 348 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 PTPN6P29350 595 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 SLC19A1P41440 591 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 ARSFP54793 590 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 C21orf58P58505 322 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 DAB2P98082 770 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 NAE1Q13564 534 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 DAG1Q14118 895 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 DOC2AQ14183 400 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 PROX2Q3B8N5 592 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 XAF1Q6GPH4 301 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 TBPL2Q6SJ96 375 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 ENPP6Q6UWR7 440 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 GPR156Q8NFN8 814 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 FBXO30Q8TB52 745 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
HMGA1-203ENST00000374116 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.24
HMGA1-203ENST00000374116 CSF3RQ99062 836 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 INPP5KQ9BT40 448 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 TBCDQ9BTW9 1192 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 BRF2Q9HAW0 419 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 FTSJ1Q9UET6 329 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 POU2F3Q9UKI9 436 aa13.58□□□□□ -0.24
HMGA1-203ENST00000374116 E7EQ34 232 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RFXANKO14593 260 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 TM4SF5O14894 197 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 SNAP29O95721 258 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ALBP02768 609 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ACADLP28330 430 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 BDKRB1P46663 353 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 LIMK1P53667 647 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 CLDN6P56747 220 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 NEDD8Q15843 81 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RPE65Q16518 533 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 C14orf28Q4W4Y0 310 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 PERM1Q5SV97 790 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 PIP4P1Q86T03 277 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 IQCF2Q8IXL9 164 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 PEX5LQ8IYB4 626 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 SVOPLQ8N434 492 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 Q8N9G6 341 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 LMNTD1Q8N9Z9 388 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 SDCCAG3Q96C92 435 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 MED8Q96G25 268 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RDH12Q96NR8 316 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 GPRC5BQ9NZH0 403 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ENPP5Q9UJA9 477 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 MAPRE3Q9UPY8 281 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ISPDA4D126 451 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 G3V2T6 193 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 LRATO95237 230 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 CST1P01037 141 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 PCNAP12004 261 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ALDH4A1P30038 563 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RCVRNP35243 200 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 TPTEP56180 551 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 GABARAPL2P60520 117 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 HHEXQ03014 270 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 TRIP6Q15654 476 aaKnown RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 RBM48Q5RL73 367 aaKnown RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 OGFOD3Q6PK18 319 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ZDHHC13Q8IUH4 622 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 LRRC56Q8IYG6 542 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 SDR16C5Q8N3Y7 309 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 FAM86B1Q8N7N1 296 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 OR7G1Q8NGA0 311 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 OR5AR1Q8NGP9 310 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 BAHD1Q8TBE0 780 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-203ENST00000374116 NCLNQ969V3 563 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 EGLN2Q96KS0 407 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 FANCEQ9HB96 536 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 LRIT1Q9P2V4 623 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 CPNE7Q9UBL6 633 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 ACSL5Q9ULC5 683 aa13.57□□□□□ -0.24
HMGA1-203ENST00000374116 WDFY3Q8IZQ1 3526 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 FAM172BPA6NC97 362 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 PRKD3O94806 890 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 ALPLP05186 524 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 GSNP06396 782 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 CDKN2CP42773 168 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
HMGA1-203ENST00000374116 PNLIPRP1P54315 467 aa13.56□□□□□ -0.24
HMGA1-203ENST00000374116 IFITM3Q01628 133 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms