RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SLC48A1Q6P1K1 146 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 FAM47BQ8NA70 645 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 WDR60Q8WVS4 1066 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 COL26A1Q96A83 441 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 ROPN1LQ96C74 230 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 PPCDCQ96CD2 204 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 OR1F2PQ96R84 312 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 DPH2Q9BQC3 489 aaPredicted RBP13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 ULBP3Q9BZM4 244 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 RPF2Q9H7B2 306 aaKnown RBP13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 SLC22A11Q9NSA0 550 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 ATAD3AQ9NVI7 634 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 ANGPTL2Q9UKU9 493 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 NDUFAF1Q9Y375 327 aa13.8□□□□□ -0.2
SMPDL3B-201ENST00000373888 A0A1W2PP18 115 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 CCDC154A6NI56 674 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 C9orf172C9J069 976 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 MEN1O00255 615 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 PGRMC2O15173 223 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 CFLARO15519 480 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 LAMP1P11279 417 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 IL10P22301 178 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 S100A3P33764 101 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 GCKP35557 465 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 XCR1P46094 333 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 DGKQP52824 942 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 AP2B1P63010 937 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 PHC1P78364 1004 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 VPS26BQ4G0F5 336 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 TIGD2Q4W5G0 525 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 ARHGAP40Q5TG30 622 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 TMEM164Q5U3C3 297 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 ANKRD26P1Q6NSI1 321 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 MSANTD1Q6ZTZ1 278 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 COX15Q7KZN9 410 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 TMEM52Q8NDY8 209 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 DNAJB14Q8TBM8 379 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 UCN3Q969E3 161 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 PEX11GQ96HA9 241 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 CLPTM1LQ96KA5 538 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 DUSP26Q9BV47 211 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 BHLHE41Q9C0J9 482 aaPredicted RBP13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 MKKSQ9NPJ1 570 aaPredicted RBP13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 SH3BP4Q9P0V3 963 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 STX18Q9P2W9 335 aaKnown RBP13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 MRPS33Q9Y291 106 aaKnown RBP13.79□□□□□ -0.2
SMPDL3B-201ENST00000373888 IGLV3-12A0A075B6K2 115 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 GLOD5A6NK44 160 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 FAM227AF5H4B4 570 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 SCN2BO60939 215 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 FHP07954 510 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 HNRNPFP52597 415 aaKnown RBP13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 WNT3P56703 355 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 RCN1Q15293 331 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 TLR1Q15399 786 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 PRSS53Q2L4Q9 553 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 PGS1Q32NB8 556 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 C11orf91Q3C1V1 193 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 REP15Q6BDI9 236 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 ZNF517Q6ZMY9 492 aaPredicted RBP13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 MARCH9Q86YJ5 346 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 ZNF595Q8IYB9 648 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 NATD1Q8N6N6 113 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 TANKQ92844 425 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 RNF31Q96EP0 1072 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 SPRY4Q9C004 299 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 POLR1BQ9H9Y6 1135 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 C5AR2Q9P296 337 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 UTS2RQ9UKP6 389 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
SMPDL3B-201ENST00000373888 PTPRBP23467 1997 aa13.77□□□□□ -0.2
SMPDL3B-201ENST00000373888 FER1L5A0AVI2 2057 aa13.77□□□□□ -0.2
SMPDL3B-201ENST00000373888 ASPDHA6ND91 283 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 WASHC1A8K0Z3 465 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 FBP2O00757 339 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 MRASO14807 208 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 ANGPT2O15123 496 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 STK17BO94768 372 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 BMP10O95393 424 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 DLGAP3O95886 979 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 KLK3P07288 261 aaPredicted RBP13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 AGXTP21549 392 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 FRKP42685 505 aaPredicted RBP13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 SLC34A1Q06495 639 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 CEBPEQ15744 281 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 MPEG1Q2M385 716 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 SPATS1Q496A3 300 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 PIGGQ5H8A4 983 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 OR4F3Q6IEY1 312 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 ZC3H7AQ8IWR0 971 aaKnown RBP13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 FKBP10Q96AY3 582 aa13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 EXOSC8Q96B26 276 aaKnown RBP13.77□□□□□ -0.21
SMPDL3B-201ENST00000373888 RBCK1Q9BYM8 510 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms