RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TSPAN6O43657 245 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 LATS1O95835 1130 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 ELK4P28324 431 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 GRPRP30550 384 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM25Q86YD3 366 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 SAMD12Q8N8I0 201 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 ZSCAN1Q8NBB4 408 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 RPLP0P6Q8NHW5 317 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM125Q96AQ2 219 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 MAPKAP1Q9BPZ7 522 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 EXTL2Q9UBQ6 330 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 ACTL7AQ9Y615 435 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 FBP2O00757 339 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 STC2O76061 302 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 AHSA1O95433 338 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 AGTRAPQ6RW13 159 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 OR51G2Q8NGK0 314 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 THRSPQ92748 146 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TSNAXQ99598 290 aaKnown RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 POLDIP3Q9BY77 421 aaKnown RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 C1orf21Q9H246 121 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 MTG2Q9H4K7 406 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 BORCS7-ASMTA0A0B4J1R7 106 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 MDFIC2A0A1B0GVS7 189 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TNFSF12O43508 249 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 IFNA5P01569 189 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 MT-ND5P03915 603 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 CKMT1AP12532 417 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 MAPK3P27361 379 aaPredicted RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 ZER1Q7Z7L7 766 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 FAM86B1Q8N7N1 296 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 OR5B12Q96R08 314 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 OR2M4Q96R27 311 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 APOBEC3BQ9UH17 382 aaKnown RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 SLC6A6P31641 620 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 GRIA2P42262 883 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 ABRAXAS2Q15018 415 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 NNATQ16517 81 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 SGCAQ16586 387 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 LINC00597Q9H2U6 94 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 F5H0A9 414 aaPredicted RBP13.75□□□□□ -0.21
TRAF1-201ENST00000373887 SLC22A2O15244 555 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 FASLGP48023 281 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 CDNFQ49AH0 187 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 XKR5Q6UX68 686 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 C12orf40Q86WS4 652 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 CD207Q9UJ71 328 aa13.75□□□□□ -0.21
TRAF1-201ENST00000373887 RAD51DO75771 328 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 PET100P0DJ07 73 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 GSTM2P28161 218 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 CD70P32970 193 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 AGTR2P50052 363 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 MFSD13AQ14CX5 517 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 OR9A1PQ8NGU1 263 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM246Q9BRR3 403 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 C14orf119Q9NWQ9 140 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 FEZF1A0PJY2 475 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 FLRT2O43155 660 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 CREG1O75629 220 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 ARSAP15289 507 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 GALNT2Q10471 571 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 GAS6Q14393 721 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF404Q494X3 552 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF584Q8IVC4 421 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
TRAF1-201ENST00000373887 GNPDA2Q8TDQ7 276 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 IL17FQ96PD4 163 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 FANCFQ9NPI8 374 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 MANBAO00462 879 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 HNRNPKP61978 463 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAF1-201ENST00000373887 LASP1Q14847 261 aaKnown RBP13.74□□□□□ -0.21
TRAF1-201ENST00000373887 FAM189A2Q15884 450 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 EFCAB11Q9BUY7 163 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 LMAN1LQ9HAT1 526 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 MAN2B1O00754 1011 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 CLIC3O95833 236 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 G6PDP11413 515 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 MAP2K4P45985 399 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 TGFBIQ15582 683 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
TRAF1-201ENST00000373887 USP29Q9HBJ7 922 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 PCDHGB6Q9Y5F9 930 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 TFPTP0C1Z6 253 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 CEBPBP17676 345 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 LSSP48449 732 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 PQLC3Q8N755 202 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 OR9I1Q8NGQ6 314 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 SLC35B2Q8TB61 432 aa13.74□□□□□ -0.21
TRAF1-201ENST00000373887 BIRC7Q96CA5 298 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms