RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 PEX11GQ96HA9 241 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 RBCK1Q9BYM8 510 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 TRIM8Q9BZR9 551 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 TRIM4Q9C037 500 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
RCC1-201ENST00000373831 WDR41Q9HAD4 459 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 FBXO8Q9NRD0 319 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 ATAD3AQ9NVI7 634 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
RCC1-201ENST00000373831 MS4A12Q9NXJ0 267 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 SLC25A37Q9NYZ2 338 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 NDOR1Q9UHB4 597 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
RCC1-201ENST00000373831 A0A1B0GX78 115 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 SCRG1O75711 98 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 C6orf47O95873 294 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 C1QCP02747 245 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 FTH1P19P0C7X4 201 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ITIH1P19827 911 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ETV5P41161 510 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 PSME3P61289 254 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ACTN3Q08043 901 aaPredicted RBP13.67□□□□□ -0.22
RCC1-201ENST00000373831 C6orf10Q5SRN2 563 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 HES3Q5TGS1 186 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 TMEM126BQ8IUX1 230 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 PGAM4Q8N0Y7 254 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ITCHQ96J02 903 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ZNF681Q96N22 645 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 GBP5Q96PP8 586 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 ACTR5Q9H9F9 607 aaPredicted RBP13.67□□□□□ -0.22
RCC1-201ENST00000373831 CLK4Q9HAZ1 481 aaKnown RBP13.67□□□□□ -0.22
RCC1-201ENST00000373831 SLC35C2Q9NQQ7 365 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 SLC22A11Q9NSA0 550 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 VAPAQ9P0L0 249 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 BTNL2Q9UIR0 455 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 SRPK3Q9UPE1 567 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 LOXL2Q9Y4K0 774 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 PCDHB3Q9Y5E6 796 aa13.67□□□□□ -0.22
RCC1-201ENST00000373831 A0A096LPI6 279 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 B4E171 279 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 ERAL1O75616 437 aaKnown RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 DNAJC8O75937 253 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 NTRK1P04629 796 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 GSNP06396 782 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 C8orf89P0DMQ9 161 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 RNH1P13489 461 aaKnown RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 ZNF28P17035 718 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 SLC6A2P23975 617 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 TSPAN7P41732 249 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 SKP1P63208 163 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 HBA1P69905 142 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 CEBPEQ15744 281 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
RCC1-201ENST00000373831 ANXA8L1Q5VT79 327 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 ZNF385CQ66K41 422 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 OR52E8Q6IFG1 317 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 C16orf89Q6UX73 402 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 COX15Q7KZN9 410 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 BPHLQ86WA6 291 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 OR4N5Q8IXE1 308 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 GOT1L1Q8NHS2 421 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 SUN3Q8TAQ9 357 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 LIN37Q96GY3 246 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 PRDM9Q9NQV7 894 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 CROTQ9UKG9 612 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 PCDHB14Q9Y5E9 798 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 AKAP13Q12802 2813 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 A0A1W2PRB8 838 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 MYO1GB0I1T2 1018 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 TGFBR3LH3BV60 316 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 RFXANKO14593 260 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 PDPK1O15530 556 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 FGF17O60258 216 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 LDB3O75112 727 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 JRKO75564 520 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 KCNH1O95259 989 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 NPPAP01160 153 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 RORAP35398 523 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 XCR1P46094 333 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 TRPC1P48995 793 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 DSG2Q14126 1118 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 ERV3-1Q14264 604 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 DNAL1Q4LDG9 190 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 RAB11FIP2Q7L804 512 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 ZNF551Q7Z340 670 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 ANKRD9Q96BM1 317 aaPredicted RBP13.66□□□□□ -0.22
RCC1-201ENST00000373831 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
RCC1-201ENST00000373831 CGREF1Q99674 301 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms