RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 KCT2Q8NC54 265 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 OR5P2Q8WZ92 322 aa13.65□□□□□ -0.22
LMX1B-202ENST00000373474 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.23
LMX1B-202ENST00000373474 MYH1P12882 1939 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TRIM64A6NGJ6 449 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 POLR1CO15160 346 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 PRKYO43930 277 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 GSRP00390 522 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 IFNA5P01569 189 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 STATHP02808 62 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TMEM115Q12893 351 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SCML4Q8N228 414 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 OR4K1Q8NGD4 311 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 DHRS4Q9BTZ2 278 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 A0A0J9YVX5 310 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TFPTP0C1Z6 253 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 HOXC12P31275 282 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 STT3AP46977 705 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 PGGT1BP53609 377 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 FAPQ12884 760 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF461Q8TAF7 563 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 FANK1Q8TC84 345 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ASPNQ9BXN1 380 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 NELFAQ9H3P2 528 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 GNG8Q9UK08 70 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 H7C417 338 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 BMP2P12643 396 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 GMPRP36959 345 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 KRBOX4Q5JUW0 171 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SUSD1Q6UWL2 747 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 NPWQ8N729 165 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SLC25A36Q96CQ1 311 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TEPSINQ96N21 525 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ARL6Q9H0F7 186 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TDP1Q9NUW8 608 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 MGAT4CQ9UBM8 478 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 UBR2Q8IWV8 1755 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ZCWPW2A0A1B0GU75 182 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 T-ENOLP0DO92 83 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 NR2C1P13056 603 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 JUPP14923 745 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ETV4P43268 484 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 CYP27C1Q4G0S4 372 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 CGB2Q6NT52 195 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 PSAPL1Q6NUJ1 521 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 MTFR2Q6P444 385 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 JAGN1Q8N5M9 183 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TRAM1L1Q8N609 369 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 CPNE5Q9HCH3 593 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 POLMQ9NP87 494 aaPredicted RBP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 MYH7P12883 1935 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SSX5O60225 188 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 C8orf89P0DMQ9 161 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ACRP10323 421 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TIA1P31483 386 aaKnown RBP eCLIP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SLC6A6P31641 620 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 CCKBRP32239 447 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ENPP6Q6UWR7 440 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 GID4Q8IVV7 300 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 ACBD4Q8NC06 268 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 BCL7BQ9BQE9 202 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 TTYH2Q9BSA4 534 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 PPIL3Q9H2H8 161 aaKnown RBP13.64□□□□□ -0.23
LMX1B-202ENST00000373474 DNAJC15Q9Y5T4 150 aa13.64□□□□□ -0.23
LMX1B-202ENST00000373474 SULT1C2O00338 296 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 PAK4O96013 591 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-202ENST00000373474 TNFP01375 233 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 GFOD2Q3B7J2 385 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 PLEKHG7Q6ZR37 379 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 ZSWIM9Q86XI8 627 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 PSD4Q8NDX1 1056 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 EPYCQ99645 322 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 RPP14O95059 124 aaKnown RBP13.63□□□□□ -0.23
LMX1B-202ENST00000373474 HTR1AP08908 422 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 HSD11B1P28845 292 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 MLLT3P42568 568 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-202ENST00000373474 SH3BP2P78314 561 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 TEAD2Q15562 447 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 CCBE1Q6UXH8 406 aaPredicted RBP13.63□□□□□ -0.23
LMX1B-202ENST00000373474 ARL14Q8N4G2 192 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 LTBP3Q9NS15 1303 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 MT-ND2P03891 347 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 SOD2P04179 222 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 CLCA4Q14CN2 919 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 CASTOR1Q8WTX7 329 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 OR10A4Q9H209 315 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 SYT4Q9H2B2 425 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 POLE4Q9NR33 117 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 ARMC1Q9NVT9 282 aa13.63□□□□□ -0.23
LMX1B-202ENST00000373474 TSTD3H0UI37 97 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms