RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 UPK1AO00322 258 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TOX3O15405 576 aaPredicted RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 KLHL18O94889 574 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 CCNDBP1O95273 360 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 KLK1P06870 262 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 SMIM18P0DKX4 95 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PVRP15151 417 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 HOXB6P17509 224 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 CDH3P22223 829 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 RPL3P39023 403 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 SEPHS1P49903 392 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PRDX1Q06830 199 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 MERTKQ12866 999 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PHF19Q5T6S3 580 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 KIAA1614Q5VZ46 1190 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 CPZQ66K79 652 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TMPRSS12Q86WS5 348 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ADI1Q9BV57 179 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TPT1P8Q9HAU6 139 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 MYNNQ9NPC7 610 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ATAD3AQ9NVI7 634 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PCM1Q15154 2024 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 A0A0J9YY10 115 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 C1orf226A1L170 272 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ANKDD1BA6NHY2 528 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 SLC9B1P1A6NJY1 282 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 AGRPO00253 132 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PRAMEF10O60809 474 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 CSO75390 466 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 FURINP09958 794 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ST6GAL1P15907 406 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 MAGP20916 626 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PPIBP23284 216 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 CCKBRP32239 447 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TAS2R50P59544 299 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 REEP5Q00765 189 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 C2orf80Q0P641 193 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ZNF385BQ569K4 471 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 FAM71E1Q6IPT2 247 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TMEM214Q6NUQ4 689 aaKnown RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ERICH5Q6P6B1 374 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ISLR2Q6UXK2 745 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 FKBP9P1Q75LS8 142 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 ZZZ3Q8IYH5 903 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 OR4A15Q8NGL6 344 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 MAGEE2Q8TD90 523 aaPredicted RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TMBIM1Q969X1 311 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 TRAPPC9Q96Q05 1148 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 PITHD1Q9GZP4 211 aaPredicted RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 FAM192AQ9GZU8 254 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 SMPD3Q9NY59 655 aaPredicted RBP15.19■□□□□ 0.02
C9orf78-201ENST00000372447 AHSPQ9NZD4 102 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 DNAJB9Q9UBS3 223 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
C9orf78-201ENST00000372447 WDFY3Q8IZQ1 3526 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 IGKV1-8A0A0C4DH67 115 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 H7BY64 318 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 PLOD2O00469 737 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 ANKRD34CP0C6C1 535 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 SERPINB1P30740 379 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 MC1RQ01726 317 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 TRA2AQ13595 282 aaKnown RBP eCLIP15.18■□□□□ 0.02
C9orf78-201ENST00000372447 PDE7AQ13946 482 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 ZIC1Q15915 447 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 VMACQ2NL98 169 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 FOXB2Q5VYV0 432 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 KRT80Q6KB66 452 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 TBPL2Q6SJ96 375 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 MARCH9Q86YJ5 346 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 EID3Q8N140 333 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 ANKRD53Q8N9V6 530 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 OR4K1Q8NGD4 311 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 KLHL6Q8WZ60 621 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 PPCDCQ96CD2 204 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 PYURFQ96I23 114 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 PRAP1Q96NZ9 151 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 DEPDC7Q96QD5 511 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 SPATA9Q9BWV2 254 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 ZNF768Q9H5H4 540 aaKnown RBP15.18■□□□□ 0.02
C9orf78-201ENST00000372447 NT5DC2Q9H857 520 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 MRPS30Q9NP92 439 aaKnown RBP15.18■□□□□ 0.02
C9orf78-201ENST00000372447 ZNF282Q9UDV7 671 aaPredicted RBP15.18■□□□□ 0.02
C9orf78-201ENST00000372447 UTS2RQ9UKP6 389 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 VPS4AQ9UN37 437 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 SAMD4AQ9UPU9 718 aaKnown RBP15.18■□□□□ 0.02
C9orf78-201ENST00000372447 CORO2BQ9UQ03 480 aa15.18■□□□□ 0.02
C9orf78-201ENST00000372447 SEMA3DO95025 777 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 TBX6O95947 436 aaPredicted RBP15.17■□□□□ 0.02
C9orf78-201ENST00000372447 CST1P01037 141 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 CMPK1P30085 196 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 ABATP80404 500 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.02
C9orf78-201ENST00000372447 C16orf72Q14CZ0 275 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 DEPDC1Q5TB30 811 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 KHDRBS2Q5VWX1 349 aaKnown RBP15.17■□□□□ 0.02
C9orf78-201ENST00000372447 FCRL6Q6DN72 434 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 IKBIPQ70UQ0 350 aa15.17■□□□□ 0.02
C9orf78-201ENST00000372447 TMPRSS7Q7RTY8 843 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms