RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ZNF367Q7RTV3 350 aa21.25■□□□□ 0.99
TM9SF3-201ENST00000371142 SORCS1Q8WY21 1168 aa21.25■□□□□ 0.99
TM9SF3-201ENST00000371142 TMEM234Q8WY98 164 aa21.25■□□□□ 0.99
TM9SF3-201ENST00000371142 WDR92Q96MX6 357 aa21.25■□□□□ 0.99
TM9SF3-201ENST00000371142 ATXN7L1Q9ULK2 861 aaPredicted RBP21.25■□□□□ 0.99
TM9SF3-201ENST00000371142 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 SLC16A5O15375 505 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 GTF2F2P13984 249 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 GNRHRP30968 328 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ARL3P36405 182 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 PLCXD2Q0VAA5 305 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 SLC36A3Q495N2 470 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 NEIL3Q8TAT5 605 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 PCDHB16Q9NRJ7 776 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 NFAT5O94916 1531 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 FARS2O95363 451 aaKnown RBP21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ALDOAP04075 364 aaKnown RBP21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ZNF182P17025 639 aaPredicted RBP21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 SLC10A2Q12908 348 aaPredicted RBP21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 FAM214AQ32MH5 1076 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ZNF542PQ5EBM4 170 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 TREML1Q86YW5 311 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 OR1F2PQ96R84 312 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 FZD3Q9NPG1 666 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 GNAO1P09471 354 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 FNTBP49356 437 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 HSD17B12Q53GQ0 312 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 CES4AQ5XG92 561 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ISOC1Q96CN7 298 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 CCDC86Q9H6F5 360 aaKnown RBP21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 CHRFAM7AQ494W8 412 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 GATAD2BQ8WXI9 593 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 RFT1Q96AA3 541 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 ZNF285Q96NJ3 590 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 SLC6A7Q99884 636 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 GPR174Q9BXC1 333 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 TMEM168Q9H0V1 697 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
TM9SF3-201ENST00000371142 IGLON5A6NGN9 336 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 EMC8O43402 210 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 S1PR4O95977 384 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 XKRXQ6PP77 449 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 HSPB11Q9Y547 144 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 OR10T2Q8NGX3 314 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 CD300LFQ8TDQ1 290 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 HDAC2Q92769 488 aaKnown RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 XYLT2Q9H1B5 865 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 OR10A4Q9H209 315 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 SRA1Q9HD15 236 aaKnown RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 MARCH4Q9P2E8 410 aaPredicted RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 MAFKO60675 156 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 PRLP01236 227 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 BTBD16Q32M84 506 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 RAB11FIP2Q7L804 512 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 LHFPL3Q86UP9 236 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 SIAH1Q8IUQ4 282 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 SYNPOQ8N3V7 929 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 TSACCQ96A04 125 aaPredicted RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 KIAA1143Q96AT1 154 aaPredicted RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 PPP4R1LQ9P1A2 415 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 NUFIP1Q9UHK0 495 aaKnown RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 NFS1Q9Y697 457 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 ZNF487B1APH4 448 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 EEF1E1O43324 174 aaKnown RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 LRIF1Q5T3J3 769 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 CEACAM19Q7Z692 300 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 PTBP2Q9UKA9 531 aaKnown RBP21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 DHDHQ9UQ10 334 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 A0A1W2PQU0 124 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 VMACQ2NL98 169 aa21.23■□□□□ 0.99
TM9SF3-201ENST00000371142 SFTPBP07988 381 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 GRIK2Q13002 908 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 VTCN1Q7Z7D3 282 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 WDR20Q8TBZ3 569 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 AK4P27144 223 aaPredicted RBP21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 ZNF84P51523 738 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 PLEKHG7Q6ZR37 379 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 OR52P1PQ8NH57 321 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 PAAF1Q9BRP4 392 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 EPHA6Q9UF33 1036 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 CD8B2A6NJW9 211 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 FAM189A1O60320 539 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 PLATP00750 562 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 CD8BP10966 210 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 RPS3P23396 243 aaKnown RBP eCLIP21.22■□□□□ 0.994e-7■■■□□ 15.5
TM9SF3-201ENST00000371142 NIPAL1Q6NVV3 410 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 C3orf33Q6P1S2 294 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 RNF111Q6ZNA4 994 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 SECISBP2Q96T21 854 aaKnown RBP21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 STRADBQ9C0K7 418 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 RDH8Q9NYR8 311 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 K7ERQ8 282 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 TP53I11O14683 189 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 HK3P52790 923 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 MPP2Q14168 576 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 LRRC25Q8N386 305 aaPredicted RBP21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 OR56A3Q8NH54 315 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 C16orf70Q9BSU1 422 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 DPH7Q9BTV6 452 aa21.22■□□□□ 0.99
TM9SF3-201ENST00000371142 CATSPEREQ5SY80 951 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms