RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRRG3Q9BZD7 231 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 B3GNT4Q9C0J1 378 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 KAT8Q9H7Z6 458 aaKnown RBP10.15□□□□□ -0.79
TPM3-212ENST00000368533 UCKL1Q9NWZ5 548 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 SLC17A4Q9Y2C5 497 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 BTBD3Q9Y2F9 522 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 TESMINQ9Y4I5 508 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 LINC00854A0A1B0GVQ3 168 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 WASHC1A8K0Z3 465 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ISM1B1AKI9 464 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 SDC3O75056 442 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ERN1O75460 977 aaKnown RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 NTRK1P04629 796 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 GLULP15104 373 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 AMD1P17707 334 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ITIH1P19827 911 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 KELP23276 732 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 AQP1P29972 269 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 GP2P55259 537 aaKnown RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 GNG2P59768 71 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 CHRNEQ04844 493 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ALG11Q2TAA5 492 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 PXDC1Q5TGL8 231 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 WASH2PQ6VEQ5 465 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 LYSMD2Q8IV50 215 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 CLECL1Q8IZS7 167 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 OR5K1Q8NHB7 308 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 CAMK1GQ96NX5 476 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 F2RL3Q96RI0 385 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 DCAF13Q9NV06 445 aaKnown RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 SH3BP4Q9P0V3 963 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 KIF17Q9P2E2 1029 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 FZD4Q9ULV1 537 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 BDP1A6H8Y1 2624 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 BCKDKO14874 412 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 OR1F1O43749 312 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 NDUFS2O75306 463 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 KLK1P06870 262 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 C1GALT1C1LP0DN25 315 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 COX7A2P14406 83 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 POU3F3P20264 500 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 IGFBP5P24593 272 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 FMO3P31513 532 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 KIR3DL1P43629 444 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 MAP2K4P45985 399 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 RPE65Q16518 533 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 FBXO43Q4G163 708 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 Q5BKY6 102 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ATAD3CQ5T2N8 411 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 CCBE1Q6UXH8 406 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 C17orf64Q86WR6 236 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 RASGRP3Q8IV61 690 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 LRRC56Q8IYG6 542 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 TMEFF1Q8IYR6 380 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 SVOPLQ8N434 492 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 CHDHQ8NE62 594 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 OR4K1Q8NGD4 311 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 PYURFQ96I23 114 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 WDR92Q96MX6 357 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 DPH2Q9BQC3 489 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 TUBA1CQ9BQE3 449 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 ZNF717Q9BY31 904 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 SLC29A3Q9BZD2 475 aa10.14□□□□□ -0.79
TPM3-212ENST00000368533 MOV10Q9HCE1 1003 aaKnown RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 CRNNQ9UBG3 495 aaPredicted RBP10.14□□□□□ -0.79
TPM3-212ENST00000368533 PCP4L1A6NKN8 68 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 LCMT2O60294 686 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 ANXA4P09525 319 aaPredicted RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 CLDN8P56748 225 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 SRP54P61011 504 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 NFATC4Q14934 902 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 CTU2Q2VPK5 515 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 CDONQ4KMG0 1287 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 RBM48Q5RL73 367 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 NXNL2Q5VZ03 156 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 GRHL2Q6ISB3 625 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 NXPE4Q6UWF7 544 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 NLGN4XQ8N0W4 816 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ATG16L2Q8NAA4 619 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 CCDC115Q96NT0 180 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 NECAB3Q96P71 396 aaPredicted RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 NODALQ96S42 347 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 MBOAT4Q96T53 435 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 REXO4Q9GZR2 422 aaKnown RBP10.13□□□□□ -0.79
TPM3-212ENST00000368533 KCNH6Q9H252 994 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 CENPBD1B2RD01 187 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 YY2O15391 372 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 THEGLP0DJG4 465 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 MAPK1P28482 360 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 EPS8Q12929 822 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 FXNQ16595 210 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 PRRT3Q5FWE3 981 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 LIPJQ5W064 366 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 ATG9BQ674R7 924 aa10.13□□□□□ -0.79
TPM3-212ENST00000368533 TMIGD1Q6UXZ0 262 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms