RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RTCAO00442 366 aaKnown RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 SERPINB7O75635 380 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 APBB3O95704 486 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 FUCA1P04066 466 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 POLR2IP36954 125 aaKnown RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 SMIM11AP58511 58 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 RPP38P78345 283 aaKnown RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 SLC35A2P78381 396 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 NFATC4Q14934 902 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 ANKRD34AQ69YU3 496 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 SYT13Q7L8C5 426 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 B3GNT8Q7Z7M8 397 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 KRT73Q86Y46 540 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 PARP8Q8N3A8 854 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 OR2L5Q8NG80 312 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 OR4C15Q8NGM1 316 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 FCGR1BQ92637 280 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 KLK6Q92876 244 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 CLDN23Q96B33 292 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 THAP11Q96EK4 314 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 BARD1Q99728 777 aaKnown RBP13.3□□□□□ -0.28
USF1-202ENST00000368020 SPATA5L1Q9BVQ7 753 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 LHPPQ9H008 270 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 TBC1D17Q9HA65 648 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 PCOLCE2Q9UKZ9 415 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 RAB23Q9ULC3 237 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 TESMINQ9Y4I5 508 aa13.3□□□□□ -0.28
USF1-202ENST00000368020 IGKV1-8A0A0C4DH67 115 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 ZNF99A8MXY4 864 aaPredicted RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 TNFRSF10CO14798 259 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 TMPRSS11DO60235 418 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 OPN1SWP03999 348 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 HTR1AP08908 422 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 CYP4B1P13584 511 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 AGXTP21549 392 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 UBXN2BQ14CS0 331 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 LAPTM4AQ15012 233 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 NDUFAF5Q5TEU4 345 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 MLIPQ5VWP3 458 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 LAIR2Q6ISS4 152 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 PRSS48Q7RTY5 328 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 C6orf120Q7Z4R8 191 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 UBE3DQ7Z6J8 389 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 P3H2Q8IVL5 708 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 CNIH3Q8TBE1 160 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 RORBQ92753 470 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 EXOSC8Q96B26 276 aaKnown RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 SLC35C2Q9NQQ7 365 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 LYARQ9NX58 379 aaKnown RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 WARS2Q9UGM6 360 aaKnown RBP13.29□□□□□ -0.28
USF1-202ENST00000368020 PSME2Q9UL46 239 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 HCN4Q9Y3Q4 1203 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 CCDC88CQ9P219 2028 aa13.29□□□□□ -0.28
USF1-202ENST00000368020 PTGES3LE9PB15 166 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 RGS10O43665 173 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 MPZL2O60487 215 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 GADD45GO95257 159 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 OXSR1O95747 527 aaPredicted RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 SERPIND1P05546 499 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 TFPTP0C1Z6 253 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 CDK4P11802 303 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 PCMT1P22061 227 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 GGT2P36268 569 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 BCL6P41182 706 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 KHKP50053 298 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 DGKEP52429 567 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 PLA2G16P53816 162 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 CDH12P55289 794 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 RPS15AP62244 130 aaKnown RBP13.28□□□□□ -0.28
USF1-202ENST00000368020 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 HSPB3Q12988 150 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 PRSS53Q2L4Q9 553 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 COLEC12Q5KU26 742 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 PRAMEF8Q5VWM4 474 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 PRAMEF7Q5VXH5 474 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 ZNF605Q86T29 641 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 LGI4Q8N135 537 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 SLC38A5Q8WUX1 472 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 MS4A6EQ96DS6 147 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 WDR92Q96MX6 357 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 BBS4Q96RK4 519 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 FEVQ99581 238 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 MYOCQ99972 504 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 MAPKAP1Q9BPZ7 522 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 C17orf62Q9BQA9 187 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 IER2Q9BTL4 223 aa13.28□□□□□ -0.28
USF1-202ENST00000368020 DPH7Q9BTV6 452 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms