RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ARHGEF9O43307 516 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 LETM1O95202 739 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 NTN1O95631 604 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 TSPAN12O95859 305 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 PVRP15151 417 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 CD53P19397 219 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 MMP11P24347 488 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 GSTM2P28161 218 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 TYK2P29597 1187 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 DRG2P55039 364 aaKnown RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 ENPEPQ07075 957 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 STIM1Q13586 685 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 KRTCAP3Q53RY4 240 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 RAB6CQ53S08 254 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 ARL13AQ5H913 290 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 FAM173BQ6P4H8 233 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 ARSKQ6UWY0 536 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 C11orf57Q6ZUT1 292 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 SLC26A9Q7LBE3 791 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 KLBQ86Z14 1044 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 EXD1Q8NHP7 514 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 WIPF2Q8TF74 440 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 NT5C3BQ969T7 300 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 CXorf40BQ96DE9 158 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 RNFT2Q96EX2 444 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 PGAP3Q96FM1 320 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 SMIM14Q96QK8 99 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 RIOK2Q9BVS4 552 aaKnown RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 CTDSP1Q9GZU7 261 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 RAB6CQ9H0N0 254 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 CUEDC2Q9H467 287 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 FANCEQ9HB96 536 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 HRASLS2Q9NWW9 162 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 VPS18Q9P253 973 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 OR12D3Q9UGF7 316 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 NOCTQ9UK39 431 aaKnown RBP6.72□□□□□ -1.33
H3F3A-201ENST00000366813 NEU3Q9UQ49 428 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 HS3ST3B1Q9Y662 390 aa6.72□□□□□ -1.33
H3F3A-201ENST00000366813 A6NNC1 897 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 E7EQ34 232 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 J3KR12 359 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 KLRC4O43908 158 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 MTA2O94776 668 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 WDPCPO95876 746 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 CLCNKAP51800 687 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 KPNA2P52292 529 aaKnown RBP6.71□□□□□ -1.34
H3F3A-201ENST00000366813 CACNG1Q06432 222 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 PDLIM3Q53GG5 364 aaPredicted RBP6.71□□□□□ -1.34
H3F3A-201ENST00000366813 INTS11Q5TA45 600 aaKnown RBP6.71□□□□□ -1.34
H3F3A-201ENST00000366813 BHLHB9Q6PI77 547 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 ABRAXAS1Q6UWZ7 409 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 RPRMLQ8N4K4 120 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 IQUBQ8NA54 791 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF606Q8WXB4 792 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 PSMF1Q92530 271 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 CD180Q99467 661 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 C17orf62Q9BQA9 187 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 PIMREGQ9BSJ6 248 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 Q9N2J8 555 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 SEPT11Q9NVA2 429 aaKnown RBP6.71□□□□□ -1.34
H3F3A-201ENST00000366813 BEX4Q9NWD9 120 aaPredicted RBP6.71□□□□□ -1.34
H3F3A-201ENST00000366813 STAP1Q9ULZ2 295 aa6.71□□□□□ -1.34
H3F3A-201ENST00000366813 NUP210LQ5VU65 1888 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 A0A0G2JK05 382 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 FAM170AA1A519 330 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 OR5K3A6NET4 321 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 C17orf100A8MU93 164 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 IDSB3KWA1 339 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 PSMD11O00231 422 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 SOCS2O14508 198 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 STX10O60499 249 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 KRT5P13647 590 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 ZNF8P17098 575 aaPredicted RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 CTPS1P17812 591 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 IDSP22304 550 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 CSNK1DP48730 415 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 LMAN1P49257 510 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 CTSCP53634 463 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 FOXG1P55316 489 aaPredicted RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 RPS13P62277 151 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 DCDP81605 110 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 TBL3Q12788 808 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 SLC25A52Q3SY17 297 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 TDRD12Q587J7 1177 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 KLHL35Q6PF15 583 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 SHISA6Q6ZSJ9 500 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 FAM57BQ71RH2 274 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 EID3Q8N140 333 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 OR11G2Q8NGC1 345 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 RND1Q92730 232 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 KAT2AQ92830 837 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 SIGLEC11Q96RL6 698 aa6.7□□□□□ -1.34
H3F3A-201ENST00000366813 SECISBP2Q96T21 854 aaKnown RBP6.7□□□□□ -1.34
H3F3A-201ENST00000366813 TRIM51Q9BSJ1 452 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms