RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ANGPTL1O95841 491 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 IGLV2-8P01709 118 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 MMP10P09238 476 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SMIM18P0DKX4 95 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF250P15622 560 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRLRP16471 622 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 CRISP2P16562 243 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 GOT1P17174 413 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 IL2RGP31785 369 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 OPRD1P41143 372 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NPBWR1P48145 328 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF83P51522 516 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 ARHGDIBP52566 201 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NAGLUP54802 743 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 MFAP2P55001 183 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 RPL7AP62424 266 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SIRPAP78324 504 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 BCL2L1Q07817 233 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NIPAL4Q0D2K0 466 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRPF4BQ13523 1007 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 DHX8Q14562 1220 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 RASA2Q15283 850 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 CCDC57Q2TAC2 916 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 ANKRD55Q3KP44 614 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 KRTAP6-1Q3LI64 71 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 DCAF4L1Q3SXM0 396 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 MCMDC2Q4G0Z9 681 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM225Q6GV28 225 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 JMJD6Q6NYC1 403 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FIGLAQ6QHK4 219 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 PPP1R27Q86WC6 154 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 CCDC71Q8IV32 467 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 UBALD2Q8IYN6 164 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SCYL3Q8IZE3 742 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FAM177A1Q8N128 213 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FBXW8Q8N3Y1 598 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 TEX26Q8N6G2 289 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 LRTM2Q8N967 370 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 C20orf203Q8NBC4 194 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SYNPRQ8TBG9 265 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 UBTD2Q8WUN7 234 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 TRAPPC12Q8WVT3 735 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 CRYGNQ8WXF5 182 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NEIL2Q969S2 332 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMEM159Q96B96 161 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 INTS12Q96CB8 462 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NSUN4Q96CB9 384 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 PIWIL1Q96J94 861 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FAM71F1Q96KD3 344 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 CEP170P1Q96L14 293 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SFXN2Q96NB2 322 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 IL4I1Q96RQ9 567 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NPAS2Q99743 824 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 TTYH2Q9BSA4 534 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NDFIP1Q9BT67 221 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FUT8Q9BYC5 575 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 GPR61Q9BZJ8 451 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 SDCBP2Q9H190 292 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 DPEP3Q9H4B8 488 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FNDC4Q9H6D8 234 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NT5DC2Q9H857 520 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NGBQ9NPG2 151 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 ITM2CQ9NQX7 267 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 PARP11Q9NR21 331 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 GGA3Q9NZ52 723 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 DBF4Q9UBU7 674 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 MLXQ9UH92 298 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 FZR1Q9UM11 496 aa-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 NOP58Q9Y2X3 529 aaKnown RBP-0.37□□□□□ -2.47
RNU6-54P-201ENST00000365563 COL22A1Q8NFW1 1626 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 TENM4Q6N022 2769 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 PCM1Q15154 2024 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 A0A1W2PNN7 141 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 ANKRD62A6NC57 917 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF724A8MTY0 619 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 NEDD8-MDP1E9PL57 170 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 LMO7DNF2Z398 122 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 MEIS2O14770 477 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 HS6ST1O60243 411 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 NPIPB7O75200 414 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 LYPLA1O75608 230 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 CDRT1O95170 752 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 SLC2A10O95528 541 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 IGHV2-70P01814 119 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 CSF2P04141 144 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 H2AFZP0C0S5 128 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 CT45A10P0DMU9 189 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 MMP9P14780 707 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 FOSL2P15408 326 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 MAPK4P31152 587 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 GABRA5P31644 462 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 GP5P40197 560 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 HARS2P49590 506 aaKnown RBP-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 EVCP57679 992 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 ANAPC15P60006 121 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 TLE2Q04725 743 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 UBE3AQ05086 875 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 IL15RAQ13261 267 aa-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 BAATQ14032 418 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-54P-201ENST00000365563 CCDC38Q502W7 563 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms