RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CCSO14618 274 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 OGTO15294 1046 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 KIAA0513O60268 411 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 HOXD4P09016 255 aaPredicted RBP3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZFP36L2P47974 494 aaKnown RBP3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 TAF6P49848 677 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 HERV-K104P63124 156 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 NPRL3Q12980 569 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 RPA4Q13156 261 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 PPP2R5CQ13362 524 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 MEF2DQ14814 521 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 POM121L1PQ3SYA9 428 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 TCTEX1D4Q5JR98 221 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 SLC10A5Q5PT55 438 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 C9orf66Q5T8R8 295 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZNF841Q6ZN19 808 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 MSANTD4Q8NCY6 345 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 OR1B1Q8NGR6 318 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 TCP11Q8WWU5 503 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 ESAMQ96AP7 390 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 CFAP36Q96G28 342 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 CCDC43Q96MW1 224 aaKnown RBP3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 TRIM6Q9C030 488 aaPredicted RBP3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 JPT2Q9H910 190 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 MARCH7Q9H992 704 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 NMUR1Q9HB89 426 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 RPS10P5Q9NQ39 176 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 AUP1Q9Y679 476 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 KIF7Q2M1P5 1343 aa3.42□□□□□ -1.86
RNU6-560P-201ENST00000364007 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 VEGFDO43915 354 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 GALR3O60755 368 aaPredicted RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 CSDE1O75534 798 aaKnown RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 PRDM1O75626 825 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ANXA9O76027 345 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 SEMA4FO95754 770 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 TXNDC12O95881 172 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 TPBGLP0DKB5 382 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 LMO2P25791 158 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 COPB2P35606 906 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 SLC1A4P43007 532 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 DSCR10P59022 87 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 LMO4P61968 165 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ACY1Q03154 408 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ZFP36L1Q07352 338 aaKnown RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 FASTKQ14296 549 aaKnown RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 KRT31Q15323 416 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 MUC21Q5SSG8 566 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ITIH5Q86UX2 942 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 SLC25A42Q86VD7 318 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 C17orf64Q86WR6 236 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 CCDC71Q8IV32 467 aaPredicted RBP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 C4orf32Q8N8J7 132 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 SPC24Q8NBT2 197 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 GLYATL1Q969I3 302 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 CDHR1Q96JP9 859 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 SPATA13Q96N96 652 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 ANKRD27Q96NW4 1050 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 RAB11FIP5Q9BXF6 653 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 DCLRE1BQ9H816 532 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 NT5DC2Q9H857 520 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 TEKT2Q9UIF3 430 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 FBXO7Q9Y3I1 522 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 CROCCQ5TZA2 2017 aa3.41□□□□□ -1.86
RNU6-560P-201ENST00000364007 DHX29Q7Z478 1369 aaKnown RBP3.4□□□□□ -1.86
RNU6-560P-201ENST00000364007 ABCC9O60706 1549 aa3.4□□□□□ -1.86
RNU6-560P-201ENST00000364007 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TEX48A0A1B0GUV7 120 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TLR4O00206 839 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 SLC28A1O00337 649 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TXNL1O43396 289 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 KERAO60938 352 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 IGHG1P01857 330 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 IGHG3P01860 377 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 CT45A8P0DMV1 189 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 CT45A9P0DMV2 189 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 FERP16591 822 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 IL4RP24394 825 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 STIP1P31948 543 aaKnown RBP3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 PGFP49763 221 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TKTL1P51854 596 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 LIMK2P53671 638 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 GALK2Q01415 458 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 P2RY14Q15391 338 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TMEM44Q2T9K0 475 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 CT45A2Q5DJT8 189 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 LEMD1Q68G75 181 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 REG3GQ6UW15 175 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 B3GLCTQ6Y288 498 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 Q6ZRG5 221 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 TOM1L2Q6ZVM7 507 aa3.4□□□□□ -1.87
RNU6-560P-201ENST00000364007 NUFIP2Q7Z417 695 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms