RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TM9SF2Q99805 663 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ZSCAN5AQ9BUG6 496 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 C12orf4Q9NQ89 552 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 STUB1Q9UNE7 303 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 A0A075B6Q4 140 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 IFNA16P05015 189 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 CD9P21926 228 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SGSHP51688 502 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 TBCEQ15813 527 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 GALNT7Q86SF2 657 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 KLBQ86Z14 1044 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 LAX1Q8IWV1 398 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 OR51I1Q9H343 314 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 DEC1Q9P2X7 70 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 Q9Y3F1 56 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 GRIP1Q9Y3R0 1128 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PLD2O14939 933 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SLC16A6O15403 523 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ADAM12O43184 909 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 KDM4BO94953 1096 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PRLP01236 227 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PIM1P11309 404 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ACPPP15309 386 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PSMD4P55036 377 aaKnown RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 HBA1P69905 142 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 LRRC26Q2I0M4 334 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SYT6Q5T7P8 510 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ADNP2Q6IQ32 1131 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PAMR1Q6UXH9 720 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM145Q8NBT3 493 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 GRHL3Q8TE85 626 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 DEDD2Q8WXF8 326 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 JPH3Q8WXH2 748 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SNAPC3Q92966 411 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 CXorf40BQ96DE9 158 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 NIPSNAP1Q9BPW8 284 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ARHGAP39Q9C0H5 1083 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 C1QTNF3-AMACRE9PGA6 284 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 ARHGAP33O14559 1287 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 TNFRSF10BO14763 440 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SOCS5O75159 536 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 SLC9A3P48764 834 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 FADDQ13158 208 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 TEX26Q8N6G2 289 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 TRIB2Q92519 343 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 NANSQ9NR45 359 aa13.29□□□□□ -0.28
COL6A1-201ENST00000361866 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
COL6A1-201ENST00000361866 FEZF1A0PJY2 475 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 LRRC72A6NJI9 287 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 KCNK5O95279 499 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 C1GALT1C1LP0DN25 315 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 RPL34P49207 117 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ARL4DP49703 201 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 MAZP56270 477 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 RBBP4Q09028 425 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 SLC5A12Q1EHB4 618 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 LY6G5CQ5SRR4 150 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 C1orf216Q8TAB5 229 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 PCNPQ8WW12 178 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 MYEOVQ96EZ4 313 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 PPIEQ9UNP9 301 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 IFNGP01579 166 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 KLKB1P03952 638 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 INHAP05111 366 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 SRPRAP08240 638 aaKnown RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 KELP23276 732 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 VEZF1Q14119 521 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 FGFBP1Q14512 234 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 OR2G6Q5TZ20 316 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 FAM220AQ7Z4H9 259 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 NOXA1Q86UR1 476 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF557Q8N988 423 aaPredicted RBP13.28□□□□□ -0.28
COL6A1-201ENST00000361866 OR52N2Q8NGI0 321 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 LILRB4Q8NHJ6 448 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 VMP1Q96GC9 406 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 CSF3RQ99062 836 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 ASPDHA6ND91 283 aa13.28□□□□□ -0.28
COL6A1-201ENST00000361866 SLC9A3R1O14745 358 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms