RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 LIMS1P48059 325 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 TBRG1Q3YBR2 411 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ZNF658BQ4V348 819 aaPredicted RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 TRMT11Q7Z4G4 463 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 NLGN4YQ8NFZ3 816 aaPredicted RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.06□□□□□ -0.86e-9■■■■■ 44.6
SMC3-201ENST00000361804 RAET1EQ8TD07 263 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 DEFB118Q96PH6 123 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 TM9SF2Q99805 663 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 POLR2J2Q9GZM3 115 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 DMRT3Q9NQL9 472 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 CLN6Q9NWW5 311 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ZNF221Q9UK13 617 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 GLOD5A6NK44 160 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 TLX2O43763 284 aaPredicted RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 AP2A2O94973 939 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 POP4O95707 220 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 CATP04040 527 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 TIMP2P16035 220 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 CRYBB2P43320 205 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ASMTP46597 345 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 CD83Q01151 205 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 SNAP47Q5SQN1 464 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 VN1R5Q7Z5H4 357 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ADGRF3Q8IZF5 1079 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 DEPDC4Q8N2C3 294 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 GEMIN6Q8WXD5 167 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 MRPS31Q92665 395 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 TMEM19Q96HH6 336 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ST6GAL2Q96JF0 529 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 DCLRE1CQ96SD1 692 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 MIEF1Q9NQG6 463 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 PAQR5Q9NXK6 330 aaPredicted RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 REV1Q9UBZ9 1251 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 HS3ST2Q9Y278 367 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 KLHL20Q9Y2M5 609 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 HEPACAM2A8MVW5 462 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 FRS3O43559 492 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 PRKYO43930 277 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 NCR1O76036 304 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 APOA1P02647 267 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 IFNW1P05000 195 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 MAPK8P45983 427 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ZNF91Q05481 1191 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 MAP4K2Q12851 820 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 TARDBPQ13148 414 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMC3-201ENST00000361804 HNRNPA0Q13151 305 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 SP140Q13342 867 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 NFE2L1Q14494 772 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 CDKL4Q5MAI5 379 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 B3GLCTQ6Y288 498 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 ZNF367Q7RTV3 350 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 TECPR1Q7Z6L1 1165 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 UBQLNLQ8IYU4 475 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 SLAIN1Q8ND83 568 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 VN1R2Q8NFZ6 395 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 EXOSC8Q96B26 276 aaKnown RBP10.06□□□□□ -0.8
SMC3-201ENST00000361804 AP2M1Q96CW1 435 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 F2RL3Q96RI0 385 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 SPATA7Q9P0W8 599 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 IL20RAQ9UHF4 553 aa10.06□□□□□ -0.8
SMC3-201ENST00000361804 A0A0B4J293 547 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 DVL2O14641 736 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SPINT1O43278 529 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TGM5O43548 720 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 GPR37L1O60883 481 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 IL7P13232 177 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 RAB33AQ14088 237 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SPHARQ15513 63 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SYPL1Q16563 259 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SPIN4Q56A73 249 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 HENMT1Q5T8I9 393 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 C1orf53Q5VUE5 145 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TCTN3Q6NUS6 607 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ZNF517Q6ZMY9 492 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 MMAAQ8IVH4 418 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 OR56A3Q8NH54 315 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 UBASH3BQ8TF42 649 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ZFYVE19Q96K21 471 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TSSK6Q9BXA6 273 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 A0A1W2PS29 197 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 PRAMEF27A3QJZ7 478 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SLC35F4A4IF30 521 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ANKRD34BA5PLL1 514 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 C1orf105O95561 183 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CXCR2P25025 360 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ETV5P41161 510 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ETV1P50549 477 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 DSTNP60981 165 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 MLIPQ5VWP3 458 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ADIPOR2Q86V24 386 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SLC7A13Q8TCU3 470 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 COL4A2P08572 1712 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms