RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CHDHQ8NE62 594 aaPredicted RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 OR2AG1Q9H205 316 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF286AQ9HBT8 521 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SRA1Q9HD15 236 aaKnown RBP8.95□□□□□ -0.98
VPS13A-203ENST00000360280 PTH2RP49190 550 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 HMGN3Q15651 99 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 TMEM236Q5W0B7 351 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 EPGNQ6UW88 154 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 RDH10Q8IZV5 341 aa8.95□□□□□ -0.98
VPS13A-203ENST00000360280 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 KHNYNO15037 678 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CAV2P51636 162 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ARSFP54793 590 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GSTM4Q03013 218 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 KCNC3Q14003 757 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 VITQ6UXI7 678 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF599Q96NL3 588 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ERVK13-1Q9NX77 482 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 A0A1B0GV50 99 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 AK4P27144 223 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ATP4BP51164 291 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 FGFBP1Q14512 234 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SLC36A3Q495N2 470 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 RELL1Q8IUW5 271 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 OR8J3Q8NGG0 315 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 FAM46BQ96A09 425 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CNN2Q99439 309 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ADGRB2O60241 1585 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 MPPED1O15442 326 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CSF1P09603 554 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PRKAR1BP31321 381 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SPOCK1Q08629 439 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ARHGAP11AQ6P4F7 1023 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SLC5A11Q8WWX8 675 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF681Q96N22 645 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SAGE1Q9NXZ1 904 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 FKBPLQ9UIM3 349 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 DDTLA6NHG4 134 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 KLK1P06870 262 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 RNASE10Q5GAN6 216 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 NBPF12Q5TAG4 269 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SDHAF4Q5VUM1 108 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 DPY19L4Q7Z388 723 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 KCNJ9Q92806 393 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ACBD6Q9BR61 282 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ACTR10Q9NZ32 417 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 LUZP4Q9P127 313 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PCDHGC4Q9Y5F7 938 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 MRPL3P09001 348 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 UBBP0CG47 229 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 UBCP0CG48 685 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 LAG3P18627 525 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ELK4P28324 431 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PEA15Q15121 130 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 TRAPPC6BQ86SZ2 158 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 LRRC57Q8N9N7 239 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZDHHC12Q96GR4 267 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 DPYSL5Q9BPU6 564 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 RNF208Q9H0X6 261 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF442Q9H7R0 627 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PPP4R1LQ9P1A2 415 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 WNT9AO14904 365 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 LSSP48449 732 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ERVK-16P61578 105 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PLGLAQ15195 96 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 UGT3A2Q3SY77 523 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SGPP2Q8IWX5 399 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GOLM1Q8NBJ4 401 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 MSI2Q96DH6 328 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 B3GNT2Q9NY97 397 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CD8B2A6NJW9 211 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 FMO6PO60774 539 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CD8BP10966 210 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CD52P31358 61 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 HK3P52790 923 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF572Q7Z3I7 529 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ADGRA1Q86SQ6 560 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 DERL2Q9GZP9 239 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CD300AQ9UGN4 299 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 OR6C65A6NJZ3 312 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 RDH16O75452 317 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CAPN15O75808 1086 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ZNF43P17038 809 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GPX6P59796 221 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GALK2Q01415 458 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 EMX2Q04743 252 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 PDGFRLQ15198 375 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GALNT10Q86SR1 603 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 GCM1Q9NP62 436 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 FZD10Q9ULW2 581 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 MRPS17Q9Y2R5 130 aaKnown RBP8.94□□□□□ -0.98
VPS13A-203ENST00000360280 SLC15A5A6NIM6 579 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 EEF1E1-BLOC1S5C9J1V9 151 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 ARPC5O15511 151 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 RFPL3O75679 317 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 CXCL14O95715 111 aa8.94□□□□□ -0.98
VPS13A-203ENST00000360280 NKX1-2Q9UD57 310 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms