RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CLDN16Q9Y5I7 305 aa11.67□□□□□ -0.54
NIF3L1-201ENST00000359683 CCDC88CQ9P219 2028 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 DMXL2Q8TDJ6 3036 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 LOC101059948A0A1B0GTJ6 334 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 GLOD5A6NK44 160 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 C21orf140B9A014 251 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 SCAMP2O15127 329 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 SLC22A3O75751 556 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 IL12AP29459 219 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 ADSLP30566 484 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 ALDH9A1P49189 494 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CLNS1AP54105 237 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 NME5P56597 212 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 STX1BP61266 288 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 BTG2P78543 158 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 RHAGQ02094 409 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 ACTN3Q08043 901 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 UGT8Q16880 541 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 PRSS53Q2L4Q9 553 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 OR52E8Q6IFG1 317 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 PAOXQ6QHF9 649 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 QSOX2Q6ZRP7 698 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CAMKMTQ7Z624 323 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 MTDHQ86UE4 582 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 TICAM1Q8IUC6 712 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 SCUBE1Q8IWY4 988 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 GLB1L3Q8NCI6 653 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CCDC197Q8NCU1 140 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 NUDT8Q8WV74 236 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 STARD8Q92502 1023 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 ANKRD9Q96BM1 317 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 TESCQ96BS2 214 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 SLC45A3Q96JT2 553 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 RBCK1Q9BYM8 510 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CLMPQ9H6B4 373 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 DKK4Q9UBT3 224 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CROTQ9UKG9 612 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 PSME2Q9UL46 239 aa11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 FARSAQ9Y285 508 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-201ENST00000359683 CROCCQ5TZA2 2017 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 OR2W5A6NFC9 320 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 FCHO1O14526 889 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 GPR75O95800 540 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 CYC1P08574 325 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 PPP2R1BP30154 601 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 HPCAL1P37235 193 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 ZFP36L2P47974 494 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 EFNA3P52797 238 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 RPS15P62841 145 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 IGLV3-21P80748 117 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 SRSF11Q05519 484 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 DNASE1L3Q13609 305 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 TGIF1Q15583 401 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 FUNDC1Q8IVP5 155 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 TMEM151BQ8IW70 566 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 PRSS58Q8IYP2 241 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 ENDOVQ8N8Q3 282 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 C7orf57Q8NEG2 295 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 OR4K14Q8NGD5 310 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 OR2Y1Q8NGV0 311 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 FGF11Q92914 225 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 PRPF18Q99633 342 aaKnown RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 VN1R1Q9GZP7 353 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 SOX17Q9H6I2 414 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 MIEF1Q9NQG6 463 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 C5AR2Q9P296 337 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 RAXQ9Y2V3 346 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 PCDHGA6Q9Y5G7 932 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 FREM2Q5SZK8 3169 aa11.65□□□□□ -0.54
NIF3L1-201ENST00000359683 IGKV3D-11A0A0A0MRZ8 115 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 FAM234BA2RU67 622 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC22A2O15244 555 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 FGF17O60258 216 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 LDB3O75112 727 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 COX7A2P14406 83 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 F8A1P23610 371 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 PTPN4P29074 926 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 DLSTP36957 453 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 EMP2P54851 167 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 FOXL2P58012 376 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 FOLH1Q04609 750 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC13A2Q13183 592 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 BIKQ13323 160 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CEBPEQ15744 281 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 MPEG1Q2M385 716 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 COL28A1Q2UY09 1125 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF385BQ569K4 471 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 CPTPQ5TA50 214 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 OR4N5Q8IXE1 308 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 IL22RA1Q8N6P7 574 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 OR8J2Q8NGG1 315 aa11.64□□□□□ -0.55
NIF3L1-201ENST00000359683 OR9I1Q8NGQ6 314 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms