RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 GABRA4P48169 554 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 HSD11B2P80365 405 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 TNFRSF17Q02223 184 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 SQSTM1Q13501 440 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 MAP7Q14244 749 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 MPEG1Q2M385 716 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 PERM1Q5SV97 790 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 TMTC4Q5T4D3 741 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 AAGABQ6PD74 315 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 USP53Q70EK8 1073 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 DEFB124Q8NES8 71 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ZFP28Q8NHY6 868 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 IFI44Q8TCB0 444 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF285Q96NJ3 590 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 MAPKAP1Q9BPZ7 522 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 NPLQ9BXD5 320 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 DCLRE1BQ9H816 532 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 RNPEPL1Q9HAU8 725 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 LYRM4Q9HD34 91 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 NEUROD4Q9HD90 331 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 IRAK4Q9NWZ3 460 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 TAS2R9Q9NYW1 312 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 TAS2R7Q9NYW3 318 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 UTS2RQ9UKP6 389 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ENTPD4Q9Y227 616 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 ATG4BQ9Y4P1 393 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
PDLIM5-203ENST00000359265 NUP210LQ5VU65 1888 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 CLIC1O00299 241 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 CDX4O14627 284 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 TOX3O15405 576 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PROM1O43490 865 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 HCRTR1O43613 425 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 GALR3O60755 368 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 KRT36O76013 467 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 GP1BAP07359 652 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 CKMT2P17540 419 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 FRKP42685 505 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 AP2B1P63010 937 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 HBA1P69905 142 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 MS4A2Q01362 244 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 CFHR1Q03591 330 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ABHD18Q0P651 414 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PRSS53Q2L4Q9 553 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 SNAP47Q5SQN1 464 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 OR52E8Q6IFG1 317 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 LCN8Q6JVE9 175 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 SLC48A1Q6P1K1 146 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 TMEM71Q6P5X7 295 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 TTC29Q8NA56 475 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 HIPK4Q8NE63 616 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 OR2T12Q8NG77 320 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 SLC26A7Q8TE54 656 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 AURKBQ96GD4 344 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PCDHAC1Q9H158 963 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 SLC35C2Q9NQQ7 365 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ACSS1Q9NUB1 689 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ACTR3BQ9P1U1 418 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 C5AR2Q9P296 337 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 GMPR2Q9P2T1 348 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 MAGEL2Q9UJ55 1249 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PSME2Q9UL46 239 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 DAPP1Q9UN19 280 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 NAALAD2Q9Y3Q0 740 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 PCDHB3Q9Y5E6 796 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 GMEB1Q9Y692 573 aa13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-203ENST00000359265 ARPC2O15144 300 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 GMNNO75496 209 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 CPNE6O95741 557 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 ACP1P24666 158 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SOAT1P35610 550 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 SEPHS1P49903 392 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 EMP3P54852 163 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 MANFP55145 182 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 LIM2P55344 173 aa13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-203ENST00000359265 GAB1Q13480 694 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms