RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PRRT3Q5FWE3 981 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 PRAMEF9Q5VWM5 478 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAM109BQ6ICB4 259 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SLC15A4Q8N697 577 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ZFP90Q8TF47 636 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAR1Q8WVX9 515 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 RASSF5Q8WWW0 418 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 GAB3Q8WWW8 586 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CAMK1GQ96NX5 476 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TEX10Q9NXF1 929 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SSR3Q9UNL2 185 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SH2B3Q9UQQ2 575 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAM25AB3EWG3 89 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAM25CB3EWG5 89 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAM25GB3EWG6 89 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 LOC110117498-PIK3R3F6TDL0 507 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 GREM1O60565 184 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 NUDT14O95848 222 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CNR2P34972 360 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ALDH3B2P48448 385 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 BMXP51813 675 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 HOXC5Q00444 222 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 PDZK1Q5T2W1 519 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 UNC5DQ6UXZ4 953 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TECPR1Q7Z6L1 1165 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CADM2Q8N3J6 435 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 BTBD1Q9H0C5 482 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 KRCC1Q9NPI7 259 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 RNF6Q9Y252 685 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 HNRNPCL2B2RXH8 293 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ALPPP05187 535 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 GPX2P18283 190 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 STX4Q12846 297 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TUBA3CQ13748 450 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 MOGQ16653 247 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 MSANTD1Q6ZTZ1 278 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 B3GNT8Q7Z7M8 397 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TTLQ8NG68 377 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ASB16Q96NS5 453 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 INSM2Q96T92 566 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 RHNO1Q9BSD3 238 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 VNN3Q9NY84 501 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 PPM1DO15297 605 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CERS1P27544 350 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TAB1Q15750 504 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SYPL1Q16563 259 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CTU2Q2VPK5 515 aaKnown RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF655Q8N720 491 aaPredicted RBP13.56□□□□□ -0.24
SIRPA-202ENST00000358771 OR52L1Q8NGH7 329 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 ABHD8Q96I13 439 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 OR51V1Q9H2C8 321 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 CDH7Q9ULB5 785 aa13.56□□□□□ -0.24
SIRPA-202ENST00000358771 SPTBP11277 2137 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 B4DGG1 531 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 BTN3A3O00478 584 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 TMCC2O75069 709 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ADH1BP00325 375 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 PIK3CBP42338 1070 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 OR4C11Q6IEV9 310 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 COX18Q8N8Q8 333 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 NDNFQ8TB73 568 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 OR2M4Q96R27 311 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 QRSL1Q9H0R6 528 aaKnown RBP13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ANKRA2Q9H9E1 313 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 SERHLQ9NQF3 203 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ENPP4Q9Y6X5 453 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 FURINP09958 794 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 IL1RNP18510 177 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 PCGF2P35227 344 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 PGDP52209 483 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 PPP2R2BQ00005 443 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 MAD2L1BPQ15013 274 aaPredicted RBP13.55□□□□□ -0.24
SIRPA-202ENST00000358771 LARS2Q15031 903 aaKnown RBP13.55□□□□□ -0.24
SIRPA-202ENST00000358771 LRIF1Q5T3J3 769 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF691Q5VV52 312 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 BORAQ6PGQ7 559 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 HORMAD2Q8N7B1 307 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 ZNF675Q8TD23 568 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 HPS1Q92902 700 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 TAMM41Q96BW9 452 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 LRRC3BQ96PB8 259 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 FCRL4Q96PJ5 515 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 RAB11FIP5Q9BXF6 653 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 CXorf36Q9H7Y0 433 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 SLC35C2Q9NQQ7 365 aa13.55□□□□□ -0.24
SIRPA-202ENST00000358771 SPIN1Q9Y657 262 aaPredicted RBP13.55□□□□□ -0.24
SIRPA-202ENST00000358771 C5AR1P21730 350 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms