RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CDC20Q12834 499 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM115Q12893 351 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF630Q2M218 657 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 FAHD1Q6P587 224 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF438Q7Z4V0 828 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 HSD11B1LQ7Z5J1 315 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CDH24Q86UP0 819 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 FAM124AQ86V42 546 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SYNPOQ8N3V7 929 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SLC43A3Q8NBI5 491 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 UXS1Q8NBZ7 420 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR52N2Q8NGI0 321 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR5D16Q8NGK9 328 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 DOK4Q8TEW6 326 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 UFD1Q92890 307 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 C11orf24Q96F05 449 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZIC5Q96T25 663 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC32Q9BV29 185 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 NAALAD2Q9Y3Q0 740 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PCDHGA2Q9Y5H1 932 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SNX11Q9Y5W9 270 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 FEZF1A0PJY2 475 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CCL16O15467 120 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PDPK1O15530 556 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 HOXA2O43364 376 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SOCS5O75159 536 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CSO75390 466 aaKnown RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LEFTY1O75610 366 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR2B3O76000 313 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CYBAP13498 195 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 DDX5P17844 614 aaKnown RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 RHCEP18577 417 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 MAP2K3P46734 347 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 WNT3P56703 355 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 HOXC5Q00444 222 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 B4GALNT1Q00973 533 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 MBTPS1Q14703 1052 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF791Q3KP31 576 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ALG1LQ6GMV1 187 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LRRC17Q8N6Y2 441 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR8J2Q8NGG1 315 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 GRPEL2Q8TAA5 225 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 C16orf78Q8WTQ4 265 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PIGKQ92643 395 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SLC38A2Q96QD8 506 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 KLF16Q9BXK1 252 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 GABARAPL1Q9H0R8 117 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 FBXL12Q9NXK8 326 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 MYO16Q9Y6X6 1858 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 A0A1W2PPK0 400 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CPSF4LA6NMK7 179 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GAPDHSO14556 408 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 OR1F1O43749 312 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 HPGDSO60760 199 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CPN2P22792 545 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MRPL19P49406 292 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GZMMP51124 257 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 EIF4HQ15056 248 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC58Q4VC31 144 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PLEKHS1Q5SXH7 462 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SLC35F1Q5T1Q4 408 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF697Q5TEC3 545 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 C17orf64Q86WR6 236 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 IFNL1Q8IU54 200 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 UBQLNLQ8IYU4 475 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 KRT78Q8N1N4 520 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 YIPF7Q8N8F6 280 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 L3MBTL4Q8NA19 623 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF717Q9BY31 904 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SLC6A16Q9GZN6 736 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 RNF121Q9H920 327 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TAC3Q9UHF0 121 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GRIP1Q9Y3R0 1128 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TRIM64BA6NI03 449 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 GRM6O15303 877 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 C1SP09871 688 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 RPL3P39023 403 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 FKBP1BP68106 108 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 LASP1Q14847 261 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 LARS2Q15031 903 aaKnown RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TATDN3Q17R31 274 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 C9orf64Q5T6V5 341 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 CNIH2Q6PI25 160 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 HOMEZQ8IX15 550 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 BCL7CQ8WUZ0 217 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 DEDD2Q8WXF8 326 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MAGEB10Q96LZ2 347 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PITX2Q99697 317 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MACROD1Q9BQ69 325 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 MED28Q9H204 178 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 ACER3Q9NUN7 267 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 RGS17Q9UGC6 210 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-203ENST00000358528 FBXW2Q9UKT8 454 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 TMEM98Q9Y2Y6 226 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 SPEF1Q9Y4P9 236 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 KLK4Q9Y5K2 254 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 PLXNB2O15031 1838 aa6.26□□□□□ -1.41
CSDE1-203ENST00000358528 HNRNPCL2B2RXH8 293 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms