RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PTPN6P29350 595 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 HOXC8P31273 242 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF674Q2M3X9 581 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FAM69AQ5T7M9 428 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SDHAF4Q5VUM1 108 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 PIWIL3Q7Z3Z3 882 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 C12orf45Q8N5I9 185 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF709Q8N972 641 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 OR2AJ1Q8NGZ0 328 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MUL1Q969V5 352 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ACBD6Q9BR61 282 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 NSUN3Q9H649 340 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SLC22A14Q9Y267 594 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SMIM35A0A1B0GVV1 85 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 A0A1W2PQ09 198 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 IFNA1P01562 189 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 UBBP0CG47 229 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 UBCP0CG48 685 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MLLT3P42568 568 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 RPS27AP62979 156 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 UBA52P62987 128 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GINS1Q14691 196 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 DACT2Q5SW24 774 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 PLAG1Q6DJT9 500 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 POC1BQ8TC44 478 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 HEATR1Q9H583 2144 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MEPEQ9NQ76 525 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 POLR1CO15160 346 aaPredicted RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 INPPL1O15357 1258 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 AMD1P17707 334 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM205Q6UW68 189 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GPC2Q8N158 579 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 SCGB1C1Q8TD33 95 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ZDHHC1Q8WTX9 485 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MROQ9BYG7 248 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 BCO2Q9BYV7 579 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GPR88Q9GZN0 384 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CDK2P24941 298 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GRB7Q14451 532 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GFOD2Q3B7J2 385 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 NDUFAF5Q5TEU4 345 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 HACD4Q5VWC8 232 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 GSG1LQ6UXU4 331 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 PXKQ7Z7A4 578 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM185AQ8NFB2 350 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 PEBP4Q96S96 227 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ATG5Q9H1Y0 275 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MCCC2Q9HCC0 563 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 FBRSL1Q9HCM7 1045 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 MRPL17Q9NRX2 175 aaKnown RBP8.43□□□□□ -1.06
COL6A6-201ENST00000358511 CPA4Q9UI42 421 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 UTS2RQ9UKP6 389 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ATG2BQ96BY7 2078 aa8.43□□□□□ -1.06
COL6A6-201ENST00000358511 ADH1CP00326 375 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 KLK1P06870 262 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ALAS2P22557 587 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 UQCRC2P22695 453 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 NDUFV1P49821 464 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ART1P52961 327 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 WNT4P56705 351 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 TAS2R50P59544 299 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 RCAN2Q14206 197 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SPIN3Q5JUX0 258 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OR10G6Q8NH81 332 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ELP5Q8TE02 316 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OR2M2Q96R28 347 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SLC2A6Q9UGQ3 507 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ENPP3O14638 875 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 AHCYP23526 432 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CD34P28906 385 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CGB2Q6NT52 195 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 PAPD4Q6PIY7 484 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 IDO2Q6ZQW0 420 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 FAM129CQ86XR2 697 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 AUTS2Q8WXX7 1259 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF514Q96K75 400 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SORT1Q99523 831 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OR2S2Q9NQN1 319 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 RNF11Q9Y3C5 154 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ANKRD34BA5PLL1 514 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 A8MU76 341 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 E9PI62 339 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 UBFD1O14562 309 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 TLX3O43711 291 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GNRH1P01148 92 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CAPNS1P04632 268 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SSTR4P31391 388 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 MMP12P39900 470 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OR4D2P58180 307 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 NOMO2Q5JPE7 1267 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 PARGQ86W56 976 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 PQLC3Q8N755 202 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GPR152Q8TDT2 470 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 IGFLR1Q9H665 355 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GOLGA2P5Q9HBQ8 144 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 RHCGQ9UBD6 479 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms