RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 UNQ6494/PRO21346Q6UXR6 183 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 PIGWQ7Z7B1 504 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 TICAM1Q8IUC6 712 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 SCUBE1Q8IWY4 988 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 TANKQ92844 425 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 KIAA1143Q96AT1 154 aaPredicted RBP13.97□□□□□ -0.17
CCNE1-202ENST00000357943 ANKRD9Q96BM1 317 aaPredicted RBP13.97□□□□□ -0.17
CCNE1-202ENST00000357943 PTCHD1Q96NR3 888 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 MIEF1Q9NQG6 463 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 PRDM9Q9NQV7 894 aa13.97□□□□□ -0.17
CCNE1-202ENST00000357943 APC2O95996 2303 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 BLACEA4D250 179 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 CTNSO60931 367 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 WT1P19544 449 aaPredicted RBP13.96□□□□□ -0.17
CCNE1-202ENST00000357943 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.17
CCNE1-202ENST00000357943 EIF2S3P41091 472 aaKnown RBP13.96□□□□□ -0.17
CCNE1-202ENST00000357943 CLDN8P56748 225 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 UFM1P61960 85 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 NSDHLQ15738 373 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 GSTA3Q16772 222 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 ZNF750Q32MQ0 723 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 LANCL3Q6ZV70 420 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 PLPP5Q8NEB5 264 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 FAM117AQ9C073 453 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 SDR39U1Q9NRG7 319 aaPredicted RBP13.96□□□□□ -0.17
CCNE1-202ENST00000357943 UTS2RQ9UKP6 389 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 MMACHCQ9Y4U1 282 aa13.96□□□□□ -0.17
CCNE1-202ENST00000357943 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
CCNE1-202ENST00000357943 SCN2AQ99250 2005 aa13.96□□□□□ -0.18
CCNE1-202ENST00000357943 CCDC88CQ9P219 2028 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 IGKV3D-11A0A0A0MRZ8 115 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 GABRR3A8MPY1 467 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 C9JVG2 144 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 SCAMP2O15127 329 aaKnown RBP13.95□□□□□ -0.18
CCNE1-202ENST00000357943 ALOX12BO75342 701 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 ERAL1O75616 437 aaKnown RBP13.95□□□□□ -0.18
CCNE1-202ENST00000357943 C8orf89P0DMQ9 161 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 PRPS1L1P21108 318 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 ACTN3Q08043 901 aaPredicted RBP13.95□□□□□ -0.18
CCNE1-202ENST00000357943 STX4Q12846 297 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 IL10RAQ13651 578 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 RPS6KA2Q15349 733 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 UGT8Q16880 541 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 PDCD4Q53EL6 469 aaKnown RBP13.95□□□□□ -0.18
CCNE1-202ENST00000357943 ZNF385BQ569K4 471 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 METTL21CQ5VZV1 264 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 PAOXQ6QHF9 649 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 OR7A2PQ8NGA2 310 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 STARD8Q92502 1023 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 EXOSC8Q96B26 276 aaKnown RBP13.95□□□□□ -0.18
CCNE1-202ENST00000357943 DPH1Q9BZG8 443 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 DPY30Q9C005 99 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 EHD3Q9NZN3 535 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
CCNE1-202ENST00000357943 EFSO43281 561 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 CREG1O75629 220 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 GPR75O95800 540 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 IL12AP29459 219 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 PPP2R1BP30154 601 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 PDE7AQ13946 482 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 SSPNQ14714 243 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 MPEG1Q2M385 716 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 FAM9CQ8IZT9 166 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 MIER2Q8N344 545 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 OR4K14Q8NGD5 310 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 OR9I1Q8NGQ6 314 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 KLHL29Q96CT2 875 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 CNRIP1Q96F85 164 aaPredicted RBP13.94□□□□□ -0.18
CCNE1-202ENST00000357943 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 EFHD1Q9BUP0 239 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 ALOXE3Q9BYJ1 711 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 ZNF385DQ9H6B1 395 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 SEMA3GQ9NS98 782 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 ATP6V1HQ9UI12 483 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 RAXQ9Y2V3 346 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 HS3ST3B1Q9Y662 390 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 ZZEF1O43149 2961 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 IGF2RP11717 2491 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 CHD8Q9HCK8 2581 aa13.94□□□□□ -0.18
CCNE1-202ENST00000357943 TCRBV16S1A1N1A0A5B0 115 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 TAF4O00268 1085 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 COX7A2P14406 83 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 GPX3P22352 226 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 MMP11P24347 488 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 PIK3R1P27986 724 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 OTX2P32243 289 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 HPCAL1P37235 193 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 FEN1P39748 380 aaKnown RBP13.93□□□□□ -0.18
CCNE1-202ENST00000357943 XKP51811 444 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 C21orf58P58505 322 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 STX1BP61266 288 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 IGLV3-21P80748 117 aaPredicted RBP13.93□□□□□ -0.18
CCNE1-202ENST00000357943 DUSP2Q05923 314 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 TMEM205Q6UW68 189 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 SPACA3Q8IXA5 215 aa13.93□□□□□ -0.18
CCNE1-202ENST00000357943 METTL21AQ8WXB1 218 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms