RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 MTFMTQ96DP5 389 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 IGSF21Q96ID5 467 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM43Q9BTV4 400 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 GPR63Q9BZJ6 419 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 B3GNT4Q9C0J1 378 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 BHLHE41Q9C0J9 482 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 LMAN2LQ9H0V9 348 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 NARFLQ9H6Q4 476 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 RANBP3Q9H6Z4 567 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 EMC7Q9NPA0 242 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 DNAJC11Q9NVH1 559 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 MARCH5Q9NX47 278 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ATP6V1HQ9UI12 483 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 AGAP14A8MT82 685 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 PRAMEF1O95521 474 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TRBC1P01850 177 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 HBQ1P09105 142 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 SLC2A2P11168 524 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 AOAHP28039 575 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 UQCRC1P31930 480 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TALDO1P37837 337 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 RPIAP49247 311 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 MVDP53602 400 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 AP1S2P56377 157 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 PER3P56645 1201 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 PCBP3P57721 371 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 SRP54P61011 504 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 HOXC5Q00444 222 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 DSG2Q14126 1118 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 WSCD2Q2TBF2 565 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 CD200R1LQ6Q8B3 271 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 QSOX2Q6ZRP7 698 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 UTS2BQ765I0 119 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TMC8Q8IU68 726 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 SLC34A3Q8N130 599 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 AQP11Q8NBQ7 271 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 OR9Q2Q8NGE9 314 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 PIH1D2Q8WWB5 315 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 MYEOVQ96EZ4 313 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 QRFPRQ96P65 431 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 NELL2Q99435 816 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 LIN7BQ9HAP6 207 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 ARL15Q9NXU5 204 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 TNFRSF10DQ9UBN6 386 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 VPS29Q9UBQ0 182 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 NDRG2Q9UN36 371 aaKnown RBP10.16□□□□□ -0.78
CAPN3-205ENST00000357568 HSPB11Q9Y547 144 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 PCDHGC4Q9Y5F7 938 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 KCNE2Q9Y6J6 123 aa10.16□□□□□ -0.78
CAPN3-205ENST00000357568 DNAH12Q6ZR08 3092 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 FAM240BA0A1B0GVZ2 78 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM129A0AVI4 362 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 FAM170BA6NMN3 283 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 WASHC1A8K0Z3 465 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 QSOX1O00391 747 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TPOP07202 933 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 C1SP09871 688 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 NUDT7P0C024 238 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 LAMP1P11279 417 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 CTNNB1P35222 781 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 PBX2P40425 430 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ABATP80404 500 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ZNF91Q05481 1191 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 RGS1Q08116 209 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 HACD4Q5VWC8 232 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 KIAA1211LQ6NV74 962 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 FAM26EQ8N5C1 309 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 C1QTNF7Q9BXJ2 289 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 BEX2Q9BXY8 128 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-205ENST00000357568 REV1Q9UBZ9 1251 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 HCN2Q9UL51 889 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ING4Q9UNL4 249 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 GSTK1Q9Y2Q3 226 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SYN3O14994 580 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 RAB36O95755 333 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 RHOCP08134 193 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 MYOGP15173 224 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 RPL3P39023 403 aaKnown RBP10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SLC11A2P49281 568 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 AP1S1P61966 158 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SCARB2Q14108 478 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TRIM40Q6P9F5 258 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM107Q6UX40 140 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TRILQ7L0X0 811 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 NAGSQ8N159 534 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TOR1AIP2Q8NFQ8 470 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 WDR20Q8TBZ3 569 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 GIMAP1Q8WWP7 306 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SH3KBP1Q96B97 665 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ZBED6CLQ96FA7 236 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-205ENST00000357568 TMEM169Q96HH4 297 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 RADILQ96JH8 1075 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 C17orf62Q9BQA9 187 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SPNS1Q9H2V7 528 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 ASB8Q9H765 288 aa10.15□□□□□ -0.78
CAPN3-205ENST00000357568 NMNAT1Q9HAN9 279 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-205ENST00000357568 SLC28A3Q9HAS3 691 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms