RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PGAM5Q96HS1 289 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 MSLNLQ96KJ4 702 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 DOHHQ9BU89 302 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 TP63Q9H3D4 680 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SLC2A4RGQ9NR83 387 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 BACE2Q9Y5Z0 518 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 TP53I11O14683 189 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 CARD17Q5XLA6 110 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 TXNDC8Q6A555 127 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 CPT1CQ8TCG5 803 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 P2RY13Q9BPV8 354 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 KLHL21Q9UJP4 597 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 ACSL6Q9UKU0 697 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 PIGBOS1A0A0B4J2F0 54 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 HSBP1L1C9JCN9 74 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GRID2O43424 1007 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 BRINP1O60477 761 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 PEX10O60683 326 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GABRA3P34903 492 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 PREPP48147 710 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SCGB2A2Q13296 93 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 CLDN19Q8N6F1 224 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 OR6Q1Q8NGQ2 317 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 FAM46BQ96A09 425 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SULT4A1Q9BR01 284 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 DPCDQ9BVM2 203 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 CLIC3O95833 236 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 NAA10P41227 235 aaPredicted RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 RAB4BP61018 213 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SLC36A3Q495N2 470 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SPRYD7Q5W111 196 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 NANOGP8Q6NSW7 305 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 OR14K1Q8NGZ2 314 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 AUTS2Q8WXX7 1259 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SHDQ96IW2 340 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 SECISBP2Q96T21 854 aaKnown RBP14.3□□□□□ -0.12
LMX1B-201ENST00000355497 ARL6Q9H0F7 186 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 NANOGQ9H9S0 305 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 GIMAP2Q9UG22 337 aa14.3□□□□□ -0.12
LMX1B-201ENST00000355497 BCL9LQ86UU0 1499 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 PIGRP01833 764 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 IFNA4P05014 189 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CTHP32929 405 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ECH1Q13011 328 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 KRBOX4Q5JUW0 171 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 TXNRD3NBQ6F5E7 133 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 SCLYQ96I15 445 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 RABL2AQ9UBK7 228 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 RABL2BQ9UNT1 228 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 HCRTR2O43614 444 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 GPR143P51810 404 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 MEF2AQ02078 507 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 FPGSQ05932 587 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 MS4A13Q5J8X5 152 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 GPR157Q5UAW9 335 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZDHHC14Q8IZN3 488 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 GATSQ8NAP1 163 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZSCAN1Q8NBB4 408 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF317Q96PQ6 595 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF382Q96SR6 550 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 NELL2Q99435 816 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 RXFP3Q9NSD7 469 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 A0A1W2PPK0 400 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CD8B2A6NJW9 211 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 C2orf74A8MZ97 194 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 PRKYO43930 277 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 PRAMEF11O60813 436 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CD8BP10966 210 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 POLR2CP19387 275 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 RAB4AP20338 218 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 TM4SF1P30408 202 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ALDH3B2P48448 385 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 LSSP48449 732 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ARRB1P49407 418 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF616Q08AN1 781 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 SERINC3Q13530 473 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 MSS51Q4VC12 460 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 C10orf62Q5T681 223 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 GSG1LQ6UXU4 331 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 TMEM14AQ9Y6G1 99 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 A0A0A6YYH2 397 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 A6NJ64 397 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 TYRP1P17643 537 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CAMLGP49069 296 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF33AQ06730 810 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 BATFQ16520 125 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 C22orf42Q6IC83 251 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 TREML1Q86YW5 311 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 METTL27Q8N6F8 245 aaPredicted RBP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CHPT1Q8WUD6 406 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.29□□□□□ -0.12
LMX1B-201ENST00000355497 MAN2C1Q9NTJ4 1040 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 ZNF175Q9Y473 711 aa14.29□□□□□ -0.12
LMX1B-201ENST00000355497 CREBL2O60519 120 aaPredicted RBP14.28□□□□□ -0.12
LMX1B-201ENST00000355497 SNAP29O95721 258 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms