RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IMPAD1Q9NX62 359 aa8.96□□□□□ -0.98
SMG6-202ENST00000354901 TP53BP1Q12888 1972 aaPredicted RBP8.96□□□□□ -0.98
SMG6-202ENST00000354901 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ISM1B1AKI9 464 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 NRG2O14511 850 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 APOC3P02656 99 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR56A5P0C7T3 313 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 APEX1P27695 318 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 RYKP34925 604 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 RPS19P39019 145 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 MAP2K3P46734 347 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 EPHB3P54753 998 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ST3GAL4Q11206 333 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 FADDQ13158 208 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 FGL2Q14314 439 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZNF79Q15937 498 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 XKR6Q5GH73 641 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZC3H12BQ5HYM0 836 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 ATG9BQ674R7 924 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 NOXRED1Q6NXP6 359 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 Q6ZVU0 165 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 PLPP6Q8IY26 295 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 LILRA3Q8N6C8 439 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 CHST14Q8NCH0 376 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 DNAJA4Q8WW22 397 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 SLC9A6Q92581 669 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 DCLRE1CQ96SD1 692 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 HDHD2Q9H0R4 259 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 MTG2Q9H4K7 406 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 PCDHB16Q9NRJ7 776 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZDHHC3Q9NYG2 299 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 LSM7Q9UK45 103 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 UGT2B17O75795 530 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 HOXD4P09016 255 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 RPS5P46782 204 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 PER3P56645 1201 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 PTSQ03393 145 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 HNRNPA0Q13151 305 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 EXOSC2Q13868 293 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 FCN2Q15485 313 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 C10orf62Q5T681 223 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 FRG2Q64ET8 278 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 SAXO2Q658L1 398 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR2T5Q6IEZ7 315 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 TEX261Q6UWH6 196 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 DNAJC5GQ8N7S2 189 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR9Q1Q8NGQ5 310 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR2T29Q8NH02 315 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 RBPMSQ93062 196 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 QRFPRQ96P65 431 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 FRG2BQ96QU4 278 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 MCCC1Q96RQ3 725 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZNF416Q9BWM5 594 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 GTPBP2Q9BX10 602 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 RBCK1Q9BYM8 510 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 HPF1Q9NWY4 346 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 B4GALT6Q9UBX8 382 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 EDARQ9UNE0 448 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZNF175Q9Y473 711 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 U3KQ87 197 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 TRBV5-3A0A0A0MS03 114 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 TMEM202A6NGA9 273 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 FAM220BPB1ANY3 271 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 ZNF821O75541 412 aaPredicted RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 RFPL3O75679 317 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 CDRT1O95170 752 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OR5F1O95221 314 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 RETP07949 1114 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 SRCP12931 536 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 POLR2GP62487 172 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMG6-202ENST00000354901 DEFA5Q01523 94 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 PUDPQ08623 228 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ABHD18Q0P651 414 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 CDKN3Q16667 212 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 CCSMST1Q4G0I0 132 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 BCL2L15Q5TBC7 163 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 EIF3MQ7L2H7 374 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 ADGRD2Q7Z7M1 963 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 OVCA2Q8WZ82 227 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 NARS2Q96I59 477 aaKnown RBP8.95□□□□□ -0.98
SMG6-202ENST00000354901 HSH2DQ96JZ2 352 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 SUV39H2Q9H5I1 410 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 SH3BP4Q9P0V3 963 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 DUSP12Q9UNI6 340 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 ING4Q9UNL4 249 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 INSL5Q9Y5Q6 135 aa8.95□□□□□ -0.98
SMG6-202ENST00000354901 TRBV5-4A0A0C4DH59 114 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 A0A1W2PQL4 384 aaPredicted RBP8.94□□□□□ -0.98
SMG6-202ENST00000354901 LRRC72A6NJI9 287 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 FAM25EA8MYX2 175 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 CHURC1-FNTBB4DL54 471 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 SSX5O60225 188 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 C9P02748 559 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 CSF3P09919 207 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 RD3LP0DJH9 198 aa8.94□□□□□ -0.98
SMG6-202ENST00000354901 LAMP1P11279 417 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms