RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NTMT1Q9BV86 223 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OR51J1Q9H342 316 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 MRPL39Q9NYK5 338 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 EXO1Q9UQ84 846 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 HRH3Q9Y5N1 445 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CDH10Q9Y6N8 788 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ZAR1LA6NP61 321 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 C5orf58C9J3I9 102 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PRR23D1E9PI22 279 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 BET1O15155 118 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 KDM4BO94953 1096 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ALPIP09923 528 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PRR23D2P0DMB1 279 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SMPD1P17405 629 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ETV5P41161 510 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GPR15P49685 360 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GBX2P52951 348 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ERVFC1P60507 584 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TSPAN5P62079 268 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SEMG2Q02383 582 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CACNG1Q06432 222 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CHIT1Q13231 466 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF628Q5EBL2 1059 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CLLU1Q5K131 121 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 MEDAGQ5VYS4 303 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 FRG2Q64ET8 278 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CXorf57Q6NSI4 855 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 METTL2BQ6P1Q9 378 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GPALPP1Q8IXQ4 340 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 OR11H7Q8NGC8 314 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 OR6K2Q8NGY2 324 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PIGKQ92643 395 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ART5Q96L15 291 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ERMAPQ96PL5 475 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 FRG2BQ96QU4 278 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GSX2Q9BZM3 304 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SLC32A1Q9H598 525 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CSNK1G1Q9HCP0 422 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ACER3Q9NUN7 267 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 FAM120CQ9NX05 1096 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ZMAT5Q9UDW3 170 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PCDHB1Q9Y5F3 818 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 LCTP09848 1927 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 F5H5T6 163 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 RAB36O95755 333 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 IFNA14P01570 189 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GBAP04062 536 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ANXA4P09525 319 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CTSHP09668 335 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ACSM4P0C7M7 580 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SMIM10L2AP0DMW4 78 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SMIM10L2BP0DMW5 78 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 RRASP10301 218 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 AMD1P17707 334 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CELP19835 753 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ITGB7P26010 798 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 HMGCLP35914 325 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SRP9P49458 86 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 AGFG1P52594 562 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TUSC1Q2TAM9 212 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 UBE2R2Q712K3 238 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 MS4A15Q8N5U1 240 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 LILRB1Q8NHL6 650 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GEMIN6Q8WXD5 167 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 UCN3Q969E3 161 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 RFT1Q96AA3 541 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SCRN2Q96FV2 425 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ZFP3Q96NJ6 502 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 UQCC2Q9BRT2 126 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TMEM121BQ9BXQ6 578 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CCSER2Q9H7U1 834 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 WASH6PQ9NQA3 447 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PRDM5Q9NQX1 630 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PCDHB16Q9NRJ7 776 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SRRDQ9UH36 339 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PHF11Q9UIL8 331 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PRSS21Q9Y6M0 314 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PDCD11Q14690 1871 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ARPC4-TTLL3A0A0A6YYG9 625 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 WASH4PA8MWX3 477 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 F8W810 466 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 YY2O15391 372 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 APOC3P02656 99 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 PPIBP23284 216 aaKnown RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 HOXD10P28358 340 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 EVX1P49640 407 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CDK6Q00534 326 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CDC42EP1Q00587 391 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 GAB1Q13480 694 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 LGALSLQ3ZCW2 172 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-201ENST00000352993 DCST1Q5T197 706 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 CCNJQ5T5M9 372 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF852Q6ZMS4 543 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 SZRD1Q7Z422 152 aa7.28□□□□□ -1.24
BRCA1-201ENST00000352993 TSEN54Q7Z6J9 526 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms