RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TFPIP10646 304 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 BTCP35070 178 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NFKB2Q00653 900 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 KLHL26Q53HC5 615 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SPANXN4Q5MJ08 99 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF549Q6P9A3 640 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ABHD15Q6UXT9 468 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 CLDN22Q8N7P3 220 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 BOLLQ8N9W6 283 aaKnown RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF527Q8NB42 609 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 UXS1Q8NBZ7 420 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 TTC16Q8NEE8 873 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RAB7BQ96AH8 199 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NIFKQ9BYG3 293 aaKnown RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 JPH1Q9HDC5 661 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RGS18Q9NS28 235 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 CFAP97Q9P2B7 532 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 EIF2B4Q9UI10 523 aaKnown RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SUPT3HB4E1H0 165 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 L7N2F9 121 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 VEGFDO43915 354 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 GLP2RO95838 553 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 CD1DP15813 335 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 HTR6P50406 440 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ACLYP53396 1101 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RABGGTBP53611 331 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RBBP7Q16576 425 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SLC39A12Q504Y0 691 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF730Q6ZMV8 503 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 LDLRAD3Q86YD5 345 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 GPR65Q8IYL9 337 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 BPIFCQ8NFQ6 507 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 OR52E4Q8NGH9 312 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 OR52J3Q8NH60 311 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NDRG1Q92597 394 aaKnown RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF599Q96NL3 588 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 POLE3Q9NRF9 147 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 UFSP2Q9NUQ7 469 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 A0A1B0GVI7 797 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 DBX1A6NMT0 343 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FAM72CH0Y354 149 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 HOXC6P09630 235 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SULT1A3P0DMM9 295 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SULT1A4P0DMN0 295 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 PCP4P48539 62 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FAM189BP81408 668 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NTRK2Q16620 822 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RFTN2Q52LD8 501 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FAM72AQ5TYM5 149 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FAM72DQ6L9T8 149 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FUT10Q6P4F1 479 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF551Q7Z340 670 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 FAM72BQ86X60 149 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SLC5A8Q8N695 610 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 KRTCAP2Q8N6L1 136 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NPWQ8N729 165 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 RELL2Q8NC24 303 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 CHST14Q8NCH0 376 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 C12orf66Q96MD2 445 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 TOX2Q96NM4 488 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 C19orf43Q9BQ61 176 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NDUFB11Q9NX14 153 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 NDUFAF4Q9P032 175 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 GALPQ9UBC7 116 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 SIX4Q9UIU6 781 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 LSM2Q9Y333 95 aaKnown RBP10.17□□□□□ -0.78
CAPN3-203ENST00000349748 PCDHGC4Q9Y5F7 938 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 PCDHGA5Q9Y5G8 931 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 PCDHGA1Q9Y5H4 931 aa10.17□□□□□ -0.78
CAPN3-203ENST00000349748 ARGFXA6NJG6 315 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ZNF729A6NN14 1252 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 WASH4PA8MWX3 477 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SULT1C2O00338 296 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 CA12O43570 354 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 NUDT7P0C024 238 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 BDKRB1P46663 353 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 HSPA7P48741 367 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 MRPL19P49406 292 aaKnown RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 EVX1P49640 407 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PPP3R1P63098 170 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 SLC14A1Q13336 389 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TAF1CQ15572 869 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 AKIRIN2Q53H80 203 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 AFTPHQ6ULP2 937 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 B3GLCTQ6Y288 498 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 MACC1Q6ZN28 852 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 GDPGP1Q6ZNW5 385 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 KRT77Q7Z794 578 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 ANKRD46Q86W74 232 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PDZD9Q8IXQ8 264 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PUSL1Q8N0Z8 303 aaKnown RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 PPHLN1Q8NEY8 458 aaKnown RBP10.16□□□□□ -0.78
CAPN3-203ENST00000349748 OR14A16Q8NHC5 309 aa10.16□□□□□ -0.78
CAPN3-203ENST00000349748 TM9SF4Q92544 642 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms