RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 INMT-MINDY4F8WBC2 141 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 MPZL2O60487 215 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 HCN1O60741 890 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 SLC43A1O75387 559 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 IL32P24001 234 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 MAPK1P28482 360 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ELAVL2Q12926 359 aaKnown RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 RGNQ15493 299 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 CCDC85BQ15834 202 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 HKDC1Q2TB90 917 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 CNIH2Q6PI25 160 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 WDR53Q7Z5U6 358 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 TMEM150AQ86TG1 271 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 NANOGP1Q8N7R0 232 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 AP2M1Q96CW1 435 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 TCF25Q9BQ70 676 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 MRPL9Q9BYD2 267 aaKnown RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 SLC7A5P2Q9GIP4 190 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 SCN5AQ14524 2016 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ISM1B1AKI9 464 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 TRBC1P01850 177 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ICAM2P13598 275 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ACRV1P26436 265 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 TALDO1P37837 337 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 UBE3AQ05086 875 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 SRSF11Q05519 484 aaKnown RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 IL18Q14116 193 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ANGPT1Q15389 498 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 TAF12Q16514 161 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 C16orf62Q7Z3J2 963 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 COMMD7Q86VX2 200 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 CRIPAKQ8N1N5 446 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 FAM46DQ8NEK8 389 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 MAPKAP1Q9BPZ7 522 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 KATNB1Q9BVA0 655 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 RETREG1Q9H6L5 497 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ELAC1Q9H777 363 aaKnown RBP17.78■□□□□ 0.44
SCARF1-202ENST00000348987 PPP1R3EQ9H7J1 279 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 ACER3Q9NUN7 267 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 CASP8AP2Q9UKL3 1982 aa17.78■□□□□ 0.44
SCARF1-202ENST00000348987 HLA-DQB1P01920 261 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 IGFBP1P08833 259 aaPredicted RBP17.77■□□□□ 0.44
SCARF1-202ENST00000348987 DGKAP23743 735 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 NOGQ13253 232 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 CDKN3Q16667 212 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 IFI44LQ53G44 452 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 KIF18BQ86Y91 864 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 NPAS4Q8IUM7 802 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 KCNN2Q9H2S1 579 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 HMX1Q9NP08 348 aaPredicted RBP17.77■□□□□ 0.44
SCARF1-202ENST00000348987 CRLS1Q9UJA2 301 aa17.77■□□□□ 0.44
SCARF1-202ENST00000348987 HPGDSO60760 199 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 PSIP1O75475 530 aaKnown RBP17.77■□□□□ 0.43
SCARF1-202ENST00000348987 PRKACAP17612 351 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 PTX3P26022 381 aaPredicted RBP17.77■□□□□ 0.43
SCARF1-202ENST00000348987 GALEQ14376 348 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 ZNF284Q2VY69 593 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 USP30Q70CQ3 517 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 ARL14EPQ8N8R7 260 aaPredicted RBP17.77■□□□□ 0.43
SCARF1-202ENST00000348987 OR52P1PQ8NH57 321 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 AUTS2Q8WXX7 1259 aa17.77■□□□□ 0.43
SCARF1-202ENST00000348987 GLYATL1P3A0A0U1RQE8 302 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 H3BUI4 141 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 TLR4O00206 839 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 BNIP3LO60238 219 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 GREM1O60565 184 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 C1SP09871 688 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 ITGALP20701 1170 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 CRATP43155 626 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 AGFG1P52594 562 aaKnown RBP17.76■□□□□ 0.43
SCARF1-202ENST00000348987 MLLT11Q13015 90 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-202ENST00000348987 GAB1Q13480 694 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 FCN2Q15485 313 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 AANATQ16613 207 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 TXNDC8Q6A555 127 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 C11orf65Q8NCR3 313 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 GPR26Q8NDV2 337 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 TOE1Q96GM8 510 aaKnown RBP17.76■□□□□ 0.43
SCARF1-202ENST00000348987 NPIPB15A6NHN6 443 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-202ENST00000348987 SOX14O95416 240 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 INPP1P49441 399 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 HTRA3P83110 453 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 C1DQ13901 141 aaKnown RBP17.76■□□□□ 0.43
SCARF1-202ENST00000348987 LRRC32Q14392 662 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 NCF4Q15080 339 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 LRRC73Q5JTD7 316 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 BRAT1Q6PJG6 821 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 C1GALT1C1Q96EU7 318 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 KCTD7Q96MP8 289 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 WACQ9BTA9 647 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 YIPF1Q9Y548 306 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 PCDHGB7Q9Y5F8 929 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 CDH10Q9Y6N8 788 aa17.76■□□□□ 0.43
SCARF1-202ENST00000348987 GTPBP1O00178 669 aaKnown RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 SLC9A3R1O14745 358 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-202ENST00000348987 BET1O15155 118 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms